Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1263 ATGGAGGATATTTGCAAGAAAACCACCAAGAGTTTTGAGGAAATGTGGCCTGTGCTTCAGACAGCTGTGGATAGACTCATCAACCAAATAGAAGGGGTTGACGACGATTCATGTTTCACATATGAGGATTGCATGTCCTATTTTACAACTGTTTATCGATTGTGTACAGCCCGACAACTGAGGGTTGAAAATTGCGAGCTACTCTATGCCAAATATAAGAAGGTCTTTGAAGAATATATCAATTCCACAGTTCTTCCATCTTTGCAAGGAAAGAAAGTTGAACTTATGTTGACAGAACTACTTAGAAGATGGTCAAATTACAAAATTATGACCACGTGGCTCTCAAGATTCTTTCATTATCTTGAAAGACACTTCATCTTTAGACGGCAGCTTCCTTCGCTTGAAGAAACTAGCTTCTTATCCTTCTATGACTTGGTACATGATAAGATCAATAAACAAGTTGGGGATGCTATATTAGCTATGATTGATCAGGAACAGGCAGGAGAGAAGATTGACAGAGCATTGGTTAATAACACGTTGGCCATGTACTTGGAGATTGGAGATGTCCTAAGAATAGACAATGAAAATCATTTTATAGGAAGAATGATTAAAGAGCATGCAGCATTCTACAATGATGAAGCTTCAAATTGGATAGCAAGTTCTTCCTTGAGGGATAACACACCAAAGGTGATTTCAGTTAAATTTACTTTTTGTTATTGA 720 0.375 MEDICKKTTKSFEEMWPVLQTAVDRLINQIEGVDDDSCFTYEDCMSYFTTVYRLCTARQLRVENCELLYAKYKKVFEEYINSTVLPSLQGKKVELMLTELLRRWSNYKIMTTWLSRFFHYLERHFIFRRQLPSLEETSFLSFYDLVHDKINKQVGDAILAMIDQEQAGEKIDRALVNNTLAMYLEIGDVLRIDNENHFIGRMIKEHAAFYNDEASNWIASSSLRDNTPKVISVKFTFCY* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1263 239 PANTHER CULLIN 6 233 IPR045093 -
Lja4g1263 239 Gene3D Cullin Repeats 146 232 - -
Lja4g1263 239 SUPERFAMILY Cullin repeat-like 10 225 IPR016159 -
Lja4g1263 239 Gene3D Cullin Repeats 4 144 - -
Lja4g1263 239 PANTHER CULLIN-LIKE PROTEIN 6 233 - -
Lja4g1263 239 Pfam Cullin family 16 222 IPR001373 GO:0006511|GO:0031625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1263 Lja-Chr4 11167954 11170590 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1263 K03347 - lja:Lj4g3v2365220.2 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1263 4 11167954 11170590 Lja6g2206 6 51043573 51052131 PCT
Lja6g2834 6 57555512 57563109 Lja4g1263 4 11167954 11170590 PCT