Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0651 ATGTCTTCTGAAACCAAGGGTGATAGCAAGGTTGCTATTGATGTAGCATCATGGATGTTCAATGTTGTCACATCTGTGGGAATAATCCTCGTGAACAAAGCCCTGATGGGAACATATGGTTTCAGTTTTGCAACAACGTTAACTGGTCTGCATTTTGCTACAACAACCTTGTTGACATCCTTTCTTAAGTGGATGGGATATATCCAAACCTCTCATCTTCCCTTGCCTGATCTTATCAAATATGTTCTGTTTGCAAATTTCTCTATTGTGGGAATGAATGTAAGTTTAATGTGGAACTCTGTGGGCTTCTATCAGATTGCTAAGCTGAGTATGATTCCGGTATCTTGTTTCCTGGAAATTGTCTTGGACAACGTGCGATATTCAAGGGACACAAAGCTTAGCATTTCTCTGGTTCTCCTTGGAGTTGCTGTGTGCACAGTCACTGATGTGAGTGTCAATGCCAAGGGTTTCATGGCTGCTGCAGTGGCAGTTTGGAGCACTGCACTGCAGCAATATTATGTGCATTTTCTTCAAAGGAAGTATTCTCTTGGATCGTTTAACTTGTTGGGCCACACTGCACCAGTACAAGCAACAAGTTTACTTCTAGTTGGTCCTTTTCTTGATTATTGGCTGACAAGTAAAAGAGTTGATGCCTACAACTATGGCTTGATATCCATTTTTTTCATCACTCTATCTTGCACTATCGCGGTAGGGACAAACCTCAGCCAGTTCATCTGCATCGGCAGGTTCTCAGCCGTATCATTCCAAGTCATTGGCCACATGAAGACTATTTTGGTGCTGATCTTGGGGTTCATTTTCTTTGGAAAAGAGGGTCTCAATGTGCAAGTAATCATAGGCATGGCCATTGCAATACTGGGAATGATATGGTACGGCAATGCATCTTCTAAGCCAGGAGGGAAGGAGCGTCGTAGCATCATTTCAAATCCGGTAACCAAACCACAAGAATATATTGTGCTACCAGTAGTAGTGTCTTCTGAAACTGATGATCAGGAAGTGTAG 1020 0.4245 MSSETKGDSKVAIDVASWMFNVVTSVGIILVNKALMGTYGFSFATTLTGLHFATTTLLTSFLKWMGYIQTSHLPLPDLIKYVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEIVLDNVRYSRDTKLSISLVLLGVAVCTVTDVSVNAKGFMAAAVAVWSTALQQYYVHFLQRKYSLGSFNLLGHTAPVQATSLLLVGPFLDYWLTSKRVDAYNYGLISIFFITLSCTIAVGTNLSQFICIGRFSAVSFQVIGHMKTILVLILGFIFFGKEGLNVQVIIGMAIAILGMIWYGNASSKPGGKERRSIISNPVTKPQEYIVLPVVVSSETDDQEV* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0651 339 Pfam Triose-phosphate Transporter family 23 297 IPR004853 -
Lja4g0651 339 PANTHER UDP-RHAMNOSE/UDP-GALACTOSE TRANSPORTER 4 8 314 - -
Lja4g0651 339 PANTHER SOLUTE CARRIER FAMILY 35 8 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0651 Lja-Chr4 5364118 5368465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0651 93 321 Organic Solute Cotransporters AT1G53660 26.271 3.34e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0651 - - gmx:100814890 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0651 4 5364118 5368465 Lja4g0651 4 5364118 5368465 ECH
Lja1g4565 1 59701681 59708231 Lja4g0651 4 5364118 5368465 ECH
Lja4g0651 4 5364118 5368465 Lja1g4613 1 60567441 60571443 PCT