Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4613 ATGGGTGAGGGAGAACGTTTCCAGCTGGGGACTGTTGGCGCCTTGAGTCTTTCTGTGGTGTCATCAGTGTCCATTGTGATTTGCAATAAAGCTCTCATGAGCTCACTCCATTTCATTTTTGCTACAACTTTGACAAGCTGGCATCTGCTTGTCACATTTTGTTCCCTTCATGTAGCGCTTAGAATGAGATTCTTTGAGCACAAACCTTTTGAGCAGAAAGCTGTAATGGGATTCGGGATTTTAAATGGAATCTCAATTGGTCTTTTAAATTTGAGCCTGGGGTTCAATTCTGTTGGCTTCTATCAAATGACTAAGCTGGCAATCATTCCTTGTACTGTACTGTTGGAGACCATTTTCCTCGGGAAGAGATTCAGTAAAAGAATTCAATTTGCCCTATCTACCCTCCTTTTGGGTGTTGGGATTGCAACTGTCACTGATTTGCAGCTTAATGCTCTGGGCTCTTTCTTATCTTTCTTGGCGGTGATTACAACATGTGTTGCTCAGATTATGACTAATACTATCCAGAAGAAGTATAAGGTTTCTTCCACCCAGCTTCTGTATCAATCATGTCCATATCAAGCAGCAACCCTGTTAATCTGTGGTCCATATCTGGATAAACTTTTGACAAACCTGAATGTATTCGCTTTCAAGTACACAACTCAAGTGACGGCATTCATAGTTCTTTCCTGCCTTATCTCCATCTCTGTCAATTTTAGTACATTTCTTGTTATTGGAAAGACATCTCCAGTCACCTATCAGGTTCTTGGACACCTCAAGACATGCCTCGTATTGGCATTTGGTTATATTTTACTCCGCGACCCATTCAGCTGGAGAAACATACTGGGTATTTTGGTAGCCATGATTGGAATGATTCTATATTCTTACTATTGTTCTCTTGAAAGTCAGCAAAAAGCAGTTGAAGCTGCAGCACAAGCATCCCAGGCAAGAGAAGCAGAATCTGATCCTCTCATTAGTGTGGAAAATGGAAGTGGAGTTGCGAGCGACTCAGTTGGACAAAAGTCCACTGTATGGAGCAAAGACAGAGACTAG 1050 0.4181 MGEGERFQLGTVGALSLSVVSSVSIVICNKALMSSLHFIFATTLTSWHLLVTFCSLHVALRMRFFEHKPFEQKAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETIFLGKRFSKRIQFALSTLLLGVGIATVTDLQLNALGSFLSFLAVITTCVAQIMTNTIQKKYKVSSTQLLYQSCPYQAATLLICGPYLDKLLTNLNVFAFKYTTQVTAFIVLSCLISISVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYILLRDPFSWRNILGILVAMIGMILYSYYCSLESQQKAVEAAAQASQAREAESDPLISVENGSGVASDSVGQKSTVWSKDRD* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4613 349 MobiDBLite consensus disorder prediction 327 341 - -
Lja1g4613 349 MobiDBLite consensus disorder prediction 317 349 - -
Lja1g4613 349 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 2 324 - -
Lja1g4613 349 Pfam Triose-phosphate Transporter family 21 294 IPR004853 -
Lja1g4613 349 PANTHER SOLUTE CARRIER FAMILY 35 2 324 - -
Lja1g4613 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4613 Lja-Chr1 60567441 60571443 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4613 22 331 Organic Solute Cotransporters AT1G77610 24.611 4.65e-23 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4613 K15285 - gmx:100786018 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0651 4 5364118 5368465 Lja1g4613 1 60567441 60571443 PCT