Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4565 ATGTCGTCAGCAAGCAAGGGTGATAGGAAGGCTACCCTTGATGCATCGTCATGGTTGTTCAACGTGGTCACGTCTGTGGGAATAATCCTTGTCAATAAAGCCCTGATGGCTAAATATGGTTTTAGTTTCGCTACAACTTTAACTGGTATGCATTTTGCCACAACAACCTTGTTGACGCTGGTTCTTAAGTCACTGGGATATATCACGCCCTCTCATCTTCCAATATCTGATATCATCAAATTTGTATTATTTGCCAATTTCTCCATTGTTGGAATGAATGTGAGTTTAATGTGGAACTCTGTTGGTTTTTATCAGATTGCTAAGCTTAGTATGATTCCAGTATCTTGTTTCCTGGAAGTTGTCTTGGACAATGTGCGATATTCAAGGGACACAAAGCTTAGTATTTTATTGGTTTTGCTTGGTGTTGCCATCTGTACAGTCACTGATGTCAGCGTCAATACAAAGGGTTTCGTAGCTGCTATAATAGCAGTTTGGAGCACAGCACTGCAGCAATATTATGTGCATTTTCTTCAGAGGAAGTATTCTATCGGGTCATTTAACTTGTTGGGCCACACTGCTCCAGCACAGGCAGCTAGTTTACTGCTAGTAGGCCCCTTTCTGGACTATTGGTTAACAAACAAACGAGTTGATGCCTATGGCTATGGTTTGACATCCACTTTGTTCATCATTCTGTCCTGCACCATTGCAGTAGGGACAAACCTCAGCCAGTTCATCTGCATTGGTAGGTTTACAGCGGTAACATTCCAAGTCCTTGGCCACATGAAAACCATTCTGGTGCTGATCCTAGGGTTCATTTTCTTTGGAAAAGAGGGTCTCAATCTACAAGTTGTTATAGGCATGATGATTGCAATATTGGGAATGATTTGGTATGGTAATGCATCTTCAAAGCCAGGGGGAAAAGAGCGTCGTAGCTTTTCCATTCCTTCCTCCAAAACACAAGAATATGGTGCACTACCTGTGTCCTCTGAACCAGATGAGAAGGTATAG 1008 0.4216 MSSASKGDRKATLDASSWLFNVVTSVGIILVNKALMAKYGFSFATTLTGMHFATTTLLTLVLKSLGYITPSHLPISDIIKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDNVRYSRDTKLSILLVLLGVAICTVTDVSVNTKGFVAAIIAVWSTALQQYYVHFLQRKYSIGSFNLLGHTAPAQAASLLLVGPFLDYWLTNKRVDAYGYGLTSTLFIILSCTIAVGTNLSQFICIGRFTAVTFQVLGHMKTILVLILGFIFFGKEGLNLQVVIGMMIAILGMIWYGNASSKPGGKERRSFSIPSSKTQEYGALPVSSEPDEKV* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4565 335 MobiDBLite consensus disorder prediction 302 335 - -
Lja1g4565 335 Pfam Triose-phosphate Transporter family 24 297 IPR004853 -
Lja1g4565 335 PANTHER SOLUTE CARRIER FAMILY 35 7 314 - -
Lja1g4565 335 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 7 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4565 Lja-Chr1 59701681 59708231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4565 18 320 Organic Solute Cotransporters AT1G77610 27.134 1.17e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4565 - - gmx:100794276 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4565 1 59701681 59708231 Lja1g4565 1 59701681 59708231 ECH
Lja1g4565 1 59701681 59708231 Lja4g0651 4 5364118 5368465 ECH