Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5202 ATGCATATGGGTGGTTGTCTTGGACTCCATAAAAAGCCCACGCTAATTGCTACAGCAGATGTGCCATCAAAACGATTGACACAACACAATAAGGCGGTGAAGAAAGCTAGCACATCAGAGGATTTCTGGACCACCAGCACACATGATATGGACAACAGCGCTGTTCAGTCACAGGGAAGCATCTCATCAACCAGTGTAACCAACCTACCTGCTGATCCTCATGCTGGTTCTTCCAACCCAACTGAATTTGTAAACCATGGTCTAACTCTTTGGAATCAGACACGGCAACGTTGGATAGGAAATAATAAAAGGCCTGAGAAACAAACAGAACAATCGCGTGAACCAAAATTGAGTTGGAACGCAACGTATGATAGTTTACTGGCGAGCAACAAGCCATTCCCTCAGCCTATTCCCCTTGCGGAAATGGTAGATTTTCTAGTGGATATCTGGGAACAAGAGGGCTTGTATGACTGA 474 0.4515 MHMGGCLGLHKKPTLIATADVPSKRLTQHNKAVKKASTSEDFWTTSTHDMDNSAVQSQGSISSTSVTNLPADPHAGSSNPTEFVNHGLTLWNQTRQRWIGNNKRPEKQTEQSREPKLSWNATYDSLLASNKPFPQPIPLAEMVDFLVDIWEQEGLYD* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5202 157 PANTHER DUF4050 FAMILY PROTEIN 3 157 - -
Lja3g5202 157 MobiDBLite consensus disorder prediction 44 79 - -
Lja3g5202 157 PANTHER OS07G0479600 PROTEIN 3 157 - -
Lja3g5202 157 Pfam Protein of unknown function (DUF4050) 116 157 IPR025124 -
Lja3g5202 157 Pfam Protein of unknown function (DUF4050) 46 112 IPR025124 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5202 Lja-Chr3 94319828 94323656 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5202 - - gmx:100500161 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2141 3 25078933 25081887 Lja3g5202 3 94319828 94323656 ECH
Lja4g1929 4 19599316 19603190 Lja3g5202 3 94319828 94323656 ECH
Lja3g5202 3 94319828 94323656 Lja3g5202 3 94319828 94323656 ECH
Lja3g5202 3 94319828 94323656 Lja3g2141 3 25078933 25081887 PCT