Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja3g2141 | ATGGACAACAGTGCGGTTCAGTCGCAGGGGAGTATATCTTCAGCCAGTGTAACGAACCAAGCTGTTGTTCCTCATGGTGTTTCTTCCAAAAGCAGCAACCCCACTGAATTTGTAAATCAAGGTTTAAATCTCTGGAACCAGACTAGGCAACGTTGGGTTGGACCAAAAAAGCCTGAGACCCGAACACAACAGTTGCGAGAACCTAAATTAAGAACTTATGGTCTGTGCCTTGCCAAATTTTGTTGGCTTTGCAGTTGGAATGCAACATATGAAAGTTTACTGGGGAGCAACAAGCCATTCCGTCAGCCGATTCCTCTCGCTGAAATGGTAGACTTTCTTGTGGACATCTGGGAACAAGATGGCCTTTACGATTGA | 375 | 0.4533 | MDNSAVQSQGSISSASVTNQAVVPHGVSSKSSNPTEFVNQGLNLWNQTRQRWVGPKKPETRTQQLREPKLRTYGLCLAKFCWLCSWNATYESLLGSNKPFRQPIPLAEMVDFLVDIWEQDGLYD* | 125 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja3g2141 | 124 | Pfam | Protein of unknown function (DUF4050) | 6 | 68 | IPR025124 | - | |
| Lja3g2141 | 124 | Pfam | Protein of unknown function (DUF4050) | 85 | 124 | IPR025124 | - | |
| Lja3g2141 | 124 | PANTHER | DUF4050 FAMILY PROTEIN | 1 | 124 | - | - | |
| Lja3g2141 | 124 | PANTHER | OS07G0479600 PROTEIN | 1 | 124 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lja3g2141 | Lja-Chr3 | 25078933 | 25081887 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lja3g2141 | - | - | gmx:100499770 | 221.861 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lja3g2141 | 3 | 25078933 | 25081887 | Lja3g5202 | 3 | 94319828 | 94323656 | ECH | |
| Lja4g1929 | 4 | 19599316 | 19603190 | Lja3g2141 | 3 | 25078933 | 25081887 | ECH | |
| Lja3g2141 | 3 | 25078933 | 25081887 | Lja3g2141 | 3 | 25078933 | 25081887 | ECH | |
| Lja3g5202 | 3 | 94319828 | 94323656 | Lja3g2141 | 3 | 25078933 | 25081887 | PCT |