Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4067 ATGATTTCAATTAAGAGAAGACAAAGAGGTACTCCAATCACAATGCAATCAATAAACCCTCAAGTCCAAGCCCATCCTAGCAGCCATGATGAAGAATACAATGTGAAGGACACCACCCCGCAGCTCGGGGAGCGGTGGCCTAATGGTGGAAGAGGGTGGGCGAGTGGCGGAGAAAGATCAACAAGCACATACGACCTTGTTGAGCAGATGTTTTATCTGTATGTTCGTGTGGTGAAAGCCAAAGGTCTCCCTCCCGGTACTCTCACCTCGAGCTGTGATCCTTACGTGGAGGTGAAGCTGGGGAACTACAAAGGAAGAACAAAGCACATCGAGAAGAAATTGAACCCGGAGTGGAACCAGGTCTATGCTTTCTCCAAGGACCAAATTCAATCTTCTGTTTTGGAAGTCATTGTGAAGGATAAAGAAACGTTGGGGAGAGATGATTACATTGGAAGGGTGGCTTTCGACCTCAATGAGGTTCCAACCAGAGTTCCGCCGGATAGCCCCCTGGCTCCTCAGTGGTACCGGCTCGAGGACCGGCGAGGAGAAGAGAAGGTGAGGGGTGATATCATGCTTGCAGTCTGGATGGGAACTCAAGCTGATGAAGCTTTCCCAGAAGCTTGGCATTCTGATGCTGCCACAGTTTATGGGGAGGGTGTTTTCAACATCAGATCAAAGGTTTATGTTTCACCAAAACTTTGGTATCTAAGAGTCAATGTCATTGAAGCACAAGATGTGATACCAAATGATCGAAATCGCCAACCAGATGTGTTAGTCAAAGCTCAATTGGGCAACCAAGTGCTGAGGACAAAGATATGTTCAGCTAGGACAACCACACCACTTTGGAACGAAGATTTGGTCTTTGTTGCGGCTGAACCATTTGAGGAGCAGTTGACAATTACCGTGGAGGATCGCGTTCACCCTTCAAAAGATGAGGTACTTGGGAAGATAATCTTGCCATTGACCCTCTTTGAGAAGCATCTAGACCACAGGCCGGTCCATTCTCGCTGGTTCAATCTTGAGAAATTTGGTTTTGGAGTGCTGGAACCCGATAGGAGGAATGAGCAGAAATTCTCAAGCAGGGTTCACCTTAGAGTTTGCCTTGAAGGTGGGTACCATGTCCTAGATGAGTCCACTTTGTATGCAAGTGACCAGAGACCAACGGCGAGACAACTATGGAAGCAACCTATTGGAATGCTTGAAGTAGGTATTTTAGGAGCACAAGGGCTTCTTCCAATGAAGATGAAGGATGATAACCGCGGCAGCACGGATGCATATTGTGTTGCAAAATATGGCCAGAAGTGGGTCAGAACCAGAACAATTCTTGACACTTTTAGTCCCAAATGGAATGAGCAATACACATGGGAGGTTTATGATCCTTGCACTGTGATAACATTGGGGGTGTTTGACAATTGCCATTTAGGTGCAGTGGAAAAAGCAAAAGCTACTGGTGGTAGTGCAGTCCATGATTCAAGGATTGGAAAGGTAAGGATAAGGTTATCAACACTGGAAGCTAATAGGATTTACACCAATTCTTACCCTCTTCTTGTTTTGCACCCACATGGAGTTAAGAAGATGGGTGTGCTTCAATTAGCAGTGAGGTTCACTAACCTCTCACTAGCTAACATGTTTTACATATATGGCCAACCATTGCTACCAAAGATGCATTACTTGCGTCCTTTCACAGTTAACCAAGTAGACAATTTAAGGTTCCAAGCTATGAACATTGTAGCTGTGAGGCTTGGCAGAGCTGAACCTCCCTTGAGAAAAGAGGTAGTGGAGTACATGCTGGATGTTGATTCCCATATGTGGAGCATGAGAAGAAGCAAAGCTAACTTCTTCCGCGTCATGTCACTATTTTCCGGCTTGATTAATATGGGGCAGTGGTTCAACCAAGTTTGCCATTGGAAGAACCCCATCACAACAGTTCTGGTTCATGTTCTTTTTCTGATACTGATTTGGTACCCTGAACTGGTTCTTCCAACTTTGTTTCTCTACATGTTCTTCATTGGCCTGTGGAACTACAGGTTCCGCCCAAGACACCCGCCTCACATGGATACTAAACTCTCTTGGGCAGAAGGAGTTCACCCGGATGAACTTGATGAAGAGTTTGACACATTCCCGACTTCGAGGTCGCATGATGTGGTTCGAATGAGGTATGACAGGCTTAGAAGTGTTGCAGGTAGGATTCAAACAGTTGTTGGGGACATTGCTACACAGGGAGAGAGATTCCAATCTCTAGTAAGCTGGAGAGATACAAGAGCAACCAGCATCTTTGTAGTGTTCAGCTTTTGTTCTGCAGTGGTCTTCTATGCAACACCGCCAAGGGTGGTGGCTCTGGTATCTGGTTTGTATTATTTGCGGCATCCGAAGTTTCGCAGCAAGATGCCTTCTGTACCAAGCAATTTCTTCAAGAGGCTCCCAGCTCGAACAGATAGCATGTTGTGA 2448 0.4596 MISIKRRQRGTPITMQSINPQVQAHPSSHDEEYNVKDTTPQLGERWPNGGRGWASGGERSTSTYDLVEQMFYLYVRVVKAKGLPPGTLTSSCDPYVEVKLGNYKGRTKHIEKKLNPEWNQVYAFSKDQIQSSVLEVIVKDKETLGRDDYIGRVAFDLNEVPTRVPPDSPLAPQWYRLEDRRGEEKVRGDIMLAVWMGTQADEAFPEAWHSDAATVYGEGVFNIRSKVYVSPKLWYLRVNVIEAQDVIPNDRNRQPDVLVKAQLGNQVLRTKICSARTTTPLWNEDLVFVAAEPFEEQLTITVEDRVHPSKDEVLGKIILPLTLFEKHLDHRPVHSRWFNLEKFGFGVLEPDRRNEQKFSSRVHLRVCLEGGYHVLDESTLYASDQRPTARQLWKQPIGMLEVGILGAQGLLPMKMKDDNRGSTDAYCVAKYGQKWVRTRTILDTFSPKWNEQYTWEVYDPCTVITLGVFDNCHLGAVEKAKATGGSAVHDSRIGKVRIRLSTLEANRIYTNSYPLLVLHPHGVKKMGVLQLAVRFTNLSLANMFYIYGQPLLPKMHYLRPFTVNQVDNLRFQAMNIVAVRLGRAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRVMSLFSGLINMGQWFNQVCHWKNPITTVLVHVLFLILIWYPELVLPTLFLYMFFIGLWNYRFRPRHPPHMDTKLSWAEGVHPDELDEEFDTFPTSRSHDVVRMRYDRLRSVAGRIQTVVGDIATQGERFQSLVSWRDTRATSIFVVFSFCSAVVFYATPPRVVALVSGLYYLRHPKFRSKMPSVPSNFFKRLPARTDSML* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4067 815 Gene3D C2 domain 373 533 IPR035892 -
Lja3g4067 815 Pfam C2 domain 399 515 IPR000008 -
Lja3g4067 815 Pfam C2 domain 72 175 IPR000008 -
Lja3g4067 815 Pfam C2 domain 234 340 IPR000008 -
Lja3g4067 815 Gene3D C2 domain 222 368 IPR035892 -
Lja3g4067 815 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 234 389 IPR035892 -
Lja3g4067 815 CDD C2B_MCTP_PRT_plant 72 198 - -
Lja3g4067 815 ProSiteProfiles C2 domain profile. 215 338 IPR000008 -
Lja3g4067 815 SMART C2_3c 72 169 IPR000008 -
Lja3g4067 815 SMART C2_3c 235 335 IPR000008 -
Lja3g4067 815 SMART C2_3c 399 512 IPR000008 -
Lja3g4067 815 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 23 815 - -
Lja3g4067 815 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 23 815 - -
Lja3g4067 815 ProSiteProfiles C2 domain profile. 54 175 IPR000008 -
Lja3g4067 815 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 72 212 IPR035892 -
Lja3g4067 815 Pfam Plant phosphoribosyltransferase C-terminal 660 815 IPR013583 -
Lja3g4067 815 ProSiteProfiles C2 domain profile. 381 513 IPR000008 -
Lja3g4067 815 Gene3D C2 domain 68 214 IPR035892 -
Lja3g4067 815 MobiDBLite consensus disorder prediction 21 59 - -
Lja3g4067 815 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 398 552 IPR035892 -
Lja3g4067 815 CDD C2C_MCTP_PRT_plant 235 387 - -
Lja3g4067 815 CDD C2D_MCTP_PRT_plant 400 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4067 Lja-Chr3 80023007 80025454 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4067 1 815 Lipid Metabolism Gene Families AT5G48060 73.855 0.0 1281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4067 - - gmx:102661772 1477.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1238 1 12774395 12778122 Lja3g4067 3 80023007 80025454 ECH
Lja5g2283 5 40644587 40647979 Lja3g4067 3 80023007 80025454 ECH
Lja6g0766 6 16802818 16805523 Lja3g4067 3 80023007 80025454 ECH
Lja3g4067 3 80023007 80025454 Lja3g4067 3 80023007 80025454 ECH