Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3364 ATGGCTCTTTCTTCTTCCAATGTTTCTGTGTTTTCTCTCTCACCTGTTGTGGGTGATGTTTCAAAGAAGCTTGTTTCTTCTTCTTCTTCTTCTTCTTCTATGAGCTTTGTTCCCTCTTCTTCTTCTCCTTGTTCTCAGAGAAGGAGCTTGAAGGTTTCTGCTGTGGATGCCACGGTGTCACTCACTGGGGTGATCTTTCAACCCTTTGAGGAGGTTAAGAAGGAGGTTCTGGCTGTTCCTATAGCTCCTAATGTTTCCTTGGCTCGTCAGCGCTTTGAGGATGAGTCTGAAGCTGCAATCAATGAGCAGATTAATGTGGAGTACAACGTTTCCTATGTGTACCACTCCCTCTTTGCATACTTCGACAGGGACAACATAGCCCTCAAGGGGCTTGCCAAGTTCTTTAAGGAATCAAGTGATGAAGAAAGAGGGCATGCAGAGAAACTGATGAAATATCAGAACATTCGTGGTGGAAGGGTGGTGCTGCACCCTATTGTGAGTCCCCTCTCAGAATTTGCCCATGTTGAAAAGGGGGATGCATTGTACGCCATGGAACTTGCTTTGTCATTGGAGAAGTTGGTGAATGAGAAACTTCTGAATCTTCACAGTGTGGCGGATCGTAACAATGACCCTCAACTTGCAGACTTCATTGAGAGCGAGTTTTTGGATGAACAGGTTCAATCAATTAAGAAGATATCAGAGTATGTGACTCAGCTGAGATTAGTTGGAAAGGGTCACGGTGTGTGGCACTTTGATCAACGCCTTCTTGAAGAGGGAGGTCATGCATGA 789 0.4512 MALSSSNVSVFSLSPVVGDVSKKLVSSSSSSSSMSFVPSSSSPCSQRRSLKVSAVDATVSLTGVIFQPFEEVKKEVLAVPIAPNVSLARQRFEDESEAAINEQINVEYNVSYVYHSLFAYFDRDNIALKGLAKFFKESSDEERGHAEKLMKYQNIRGGRVVLHPIVSPLSEFAHVEKGDALYAMELALSLEKLVNEKLLNLHSVADRNNDPQLADFIESEFLDEQVQSIKKISEYVTQLRLVGKGHGVWHFDQRLLEEGGHA* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3364 262 CDD Euk_Ferritin 94 253 - -
Lja3g3364 262 Pfam Ferritin-like domain 98 241 IPR008331 GO:0008199
Lja3g3364 262 PANTHER FERRITIN-2, CHLOROPLASTIC 1 259 - -
Lja3g3364 262 Gene3D - 59 259 IPR012347 -
Lja3g3364 262 PANTHER FERRITIN 1 259 IPR001519 GO:0006826|GO:0006879|GO:0008199
Lja3g3364 262 ProSitePatterns Ferritin iron-binding regions signature 2. 210 230 IPR014034 -
Lja3g3364 262 SUPERFAMILY Ferritin-like 80 257 IPR009078 -
Lja3g3364 262 ProSiteProfiles Ferritin-like diiron domain profile. 90 243 IPR009040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3364 Lja-Chr3 66381005 66383895 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3364 K00522 - gmx:100778273 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3364 3 66381005 66383895 Lja3g3364 3 66381005 66383895 ECH
Lja3g3364 3 66381005 66383895 Lja6g0362 6 9188417 9191002 ECH
Lja1g3345 1 41615741 41617320 Lja3g3364 3 66381005 66383895 PCT