Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3081 ATGGATTCACCTCCTCTGCACATAGCCATGTTTCCATTGTTTGCCATGGGCCACCTTACCCCATTTCTCCATCTCTCCAACAAATTAGCAAACAGAGGCCACAGAATTTCCTTCTTCATCCCCAAAAGAACACAATCCAAGTTAGAGCAATTCAACCTCTACCCAAACCTCATCACCTTTCACCCCATCAATGTCCCTCATGTTAATGGCCTTCCCAATGGTGCTGAAACCACTTCAGATGTGTCCTTCTCTCTAGCTCCACTCATCATGACAGCAATGGATCACACTGAAAAAGACATTGAGCTTCTCCTCACTCAGCTAAATCCTCAAATCGTTTTCTTTGATTTCACCCATTGGCTTCCCAATTTGACTCGCAGATTGGGCATCAAATCTTTTCAATACTCCATTATTAACCCTGCTACACTTCACCTCATGCAACCCCCACCTGGGTACCCTGTTTCTTCCATCAAGCTCCATGCCCATGAAGCAAAGTTTCTAGCTTCAAAGATAACCTGGGAGTTCGGTAGTGGGGTTCTTTTCTATGATCGCCTTAACAATGGTTTAACGCTTGCAGATGCAATTGGATTCAAGGGTTGCAGAGAAATTGAAGGGCCTTTTGTTGATTACCTTGGAGAGCAATTTGGGAAGCCTGTTCTGCTTTCAGGACCTGTCATACCTGAGCCATCCAACACTGTTTTGGAGAAAAAATGGGCTGAATGGCTTGGAGGATTCAAGCATGGTTCAGTAGTTTTCTGTGCATTGGGAAGTGAATGGAGGTTACCACAAGATCAATTTCAAGAACTGTTGTTGGGTCTTGAGCTAACAGATCTGCCATTTTTGGCAGTTTTGAAACCTCCTGTTGGGTGTGAAACAGTTGAAATTGCTCTGCCAGAAGGGTTTAGAGAGAGGGTTCAAGGGAGAGGGGTTGTGGAGAGTGGGTGGATTCAGCAGCAGCTGATTTTGCAACACCCTTCTGTGGGTTGCTTTGTGACACATTGTGGGGCTGGTTCATTGACAGAGGCACTGATGAGTAAGTGTCAGATAGTGTTGTTGCCACAGCTTGATGCTGATCACATTGTTAATGCAAGGATGATGGGTGGAAACTTGAAGGTTGGGGTTGAAGTGGAGAAGGGTGAAGAAGATGGGTTGTTCAAAAAGGAAAGTGTTTGTGAAGCTGTGAAAATTGTGATGGATGATGAGAGTGAGGTTGGCAGAGAAGTAAGGGAAAATCATAGCAAAGTGAAGAACCTTTTACTCAGCTACAATTTGGAGTCAGACTCTATTGATTGTTTCTGCAAGAAGCTACAAGATTTACTAAAGTGA 1323 0.4422 MDSPPLHIAMFPLFAMGHLTPFLHLSNKLANRGHRISFFIPKRTQSKLEQFNLYPNLITFHPINVPHVNGLPNGAETTSDVSFSLAPLIMTAMDHTEKDIELLLTQLNPQIVFFDFTHWLPNLTRRLGIKSFQYSIINPATLHLMQPPPGYPVSSIKLHAHEAKFLASKITWEFGSGVLFYDRLNNGLTLADAIGFKGCREIEGPFVDYLGEQFGKPVLLSGPVIPEPSNTVLEKKWAEWLGGFKHGSVVFCALGSEWRLPQDQFQELLLGLELTDLPFLAVLKPPVGCETVEIALPEGFRERVQGRGVVESGWIQQQLILQHPSVGCFVTHCGAGSLTEALMSKCQIVLLPQLDADHIVNARMMGGNLKVGVEVEKGEEDGLFKKESVCEAVKIVMDDESEVGREVRENHSKVKNLLLSYNLESDSIDCFCKKLQDLLK* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3081 440 Gene3D Glycogen Phosphorylase B; 2 235 - -
Lja3g3081 440 CDD GT1_Gtf-like 6 415 IPR002213 GO:0008194
Lja3g3081 440 PANTHER ANTHOCYANIDIN 3-O-GLUCOSIDE 2''-O-GLUCOSYLTRANSFERASE-RELATED 4 437 - -
Lja3g3081 440 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 420 - -
Lja3g3081 440 Gene3D Glycogen Phosphorylase B; 236 419 - -
Lja3g3081 440 PANTHER GLYCOSYLTRANSFERASE 4 437 - -
Lja3g3081 440 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 313 401 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3081 Lja-Chr3 58363484 58365059 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3081 6 439 Glycosyltransferase AT4G27570 47.982 1.43e-149 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3081 K22794 - gmx:100808470 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3083 3 58379014 58380596 Lja3g3081 3 58363484 58365059 PCT
Lja3g3081 3 58363484 58365059 Lja3g3033 3 56643183 56644568 PCT