Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3083 ATGGATTCACCTTCTTTGCACATAGCAATGTTCCCATGGTTTGCTATGGGGCACCTGACCCCTTATCTCCACCTCTCTAACAAATTAGCAAAAAGAGGACACAAAATCTCCTTCTTCATCCCCAAAAGAACACAAGCAAAGTTACAACATCTCAACCTTCACCCAAATCTTATTACCTTTATCCCCATCACTGTTCCTCATGCTGATGGCCTTCCTCATAATGCTGAAACCACTTCAGAAGTTCCCTTCTCCTTATTCTCAAATCTTGCCACAGCTTTGGATCACACAGAGAAGGACATTGAACCTCTGCTGAGGGTGCTAAACCCACAAATTGTTTTCTTTGATTTTCAACACTGGCTACCAAACATGGCAAGGAGCCTTGGCATCAAGAGTGTCCAGTACTTCATAGTTAATCCAGTAACATCAGCATCAAGAGTGTTCAATACTTCCCTTGGGAGACAGAGCCAAGGAACAGAGTTCCCTGGTTCATCCTTTAAGTTTTATAAACATGAACTTCGATTCCTAGCTGGCACGAGGGAACTGGTGTTTGGAAGTGGTATTTTGTTTCATGATCGCTTAGGCACGGGTACAAGCTTGTCAGATGCAATTGGGTTCAAAGGTTGCAGAGAACTTGATGGACCATATGCAGAGTATCTTGAAAATGTATATAAGAAGCCTGTTCTGCTTTCAGGCCCTCTTTTACCAGAGCCATCAAACTCTACTTTGGAGGAAAAATGGGTTTCATGGCTTGAGAAATTCAATTCTGGTTCTGTGGTTTTCTGTGCATATGGAAGTGAAGGTCCATTACAGCAGAATCAGTTTCAGGAATTGTTGCTTGGTCTTGAGTTAACAGGTTTTCCATTTCTTGCAGCACTTAAGCCCCCTACTGGATTTGAGTCTATTGAAGAAGCTCTTCCTGAAGGATTCAAAGAAAGGGTTCAGGGAAGAGGGATTGCATATGGAGGTTGGGTTCAGCAGCAATTGATTTTAGGACACCCTTCTGTTGGTTGCTTCATAACACACTGTGGTGCAGCTTCTATCACTGAGGCACTTGTCAGCACCTGTCAAATGGTGCTGCTACCGCGGTTAGGCTCTGATCATATCATGAATGCGCGGGTGATGAGTGCACAATTAAAGGTTGGGGTAGAAGTGGAGAAAGAAGAACAAGACGGGTTATTCACTAAAGAAAGTGTATGCAGAGCTGTGAAAACTGTGATGGATGATGAGAGTGAGCTTGGAAGAGAAGTGAGAGCAAATCATACCAGAGTGAGGAATTTATTACTGGGTGAAAATTTAGAGTCCTCATGTGTTGATACTTTCTGCCAAAGGCTTCAAGAGTTGTTGCAAATTCTACCTGAGTAG 1362 0.431 MDSPSLHIAMFPWFAMGHLTPYLHLSNKLAKRGHKISFFIPKRTQAKLQHLNLHPNLITFIPITVPHADGLPHNAETTSEVPFSLFSNLATALDHTEKDIEPLLRVLNPQIVFFDFQHWLPNMARSLGIKSVQYFIVNPVTSASRVFNTSLGRQSQGTEFPGSSFKFYKHELRFLAGTRELVFGSGILFHDRLGTGTSLSDAIGFKGCRELDGPYAEYLENVYKKPVLLSGPLLPEPSNSTLEEKWVSWLEKFNSGSVVFCAYGSEGPLQQNQFQELLLGLELTGFPFLAALKPPTGFESIEEALPEGFKERVQGRGIAYGGWVQQQLILGHPSVGCFITHCGAASITEALVSTCQMVLLPRLGSDHIMNARVMSAQLKVGVEVEKEEQDGLFTKESVCRAVKTVMDDESELGREVRANHTRVRNLLLGENLESSCVDTFCQRLQELLQILPE* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3083 453 CDD GT1_Gtf-like 6 410 IPR002213 GO:0008194
Lja3g3083 453 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 323 410 IPR002213 GO:0008194
Lja3g3083 453 PANTHER UDP-GLYCOSYLTRANSFERASE SUPERFAMILY PROTEIN 3 446 - -
Lja3g3083 453 Gene3D Glycogen Phosphorylase B; 2 246 - -
Lja3g3083 453 Gene3D Glycogen Phosphorylase B; 247 427 - -
Lja3g3083 453 PANTHER GLYCOSYLTRANSFERASE 3 446 - -
Lja3g3083 453 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3083 Lja-Chr3 58379014 58380596 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3083 6 449 Glycosyltransferase AT5G54010 46.903 5.29e-150 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3083 K22794 K12933 gmx:100808439 678.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3083 3 58379014 58380596 Lja3g3081 3 58363484 58365059 PCT