Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1956 ATGGGTGCTAATTTTTCCTCTTATGATGGGGATTCTGCTGCTTTGGGACCATGGCTTGGGGATATACCTGAGGGTTGTGTGGCATTGGCGTTTCGTGATGCTTCATTTGCAGATTTTATCTGGGAATCGAAGTTGCCTTTGAATTATAAGTTTATTGTAGAGAAAGCTTTGGGGGATGCTTCTGTTGCAGAATTGGGGAAGAGGGATGTTTATGCAGCACTCTGCAGGCCTAATTTGTTTGACAATGAAACCAAGGAAATTTGGCTAGATAAGAGGACGGGTGGAGTTTGTTTGGCGATTTCTTCCAAAGCGTTGAGGATTACAGGGATAGATGATCGGAGATATTGGAATCACATTGCGACTAAAGAGTCAAGGTTCCATACAGTTGCATATCTTCAACAAATTTGGTGGCTTGAAGTGGAAGGAGATATTGATTTCCAATTTCCACATGGAACATACAGTGTGTTCTTCAGACTCTACCTTGGCAGGTCATCCAAGAAGCTGGGTCGTCGAGTTTGTAAGACTGAGCACATCCATGGTTGGGATATAAAACCTGTCAAATTTCAGCTTACGACTTCTGATGGCCAACATGCTGAATCCCATAGTCATTTGGATAATCCAGGGCACTGGGTCCTCTACCATGCAGGAAACTTTGTTTCTAAGAATTCAAATGATTTGATGAATATCAAATTTTCATTATCTCAAATCGATTGCACTCATACGAAAGGTGGTTTGTGTGTAGACTCTGTACTTATATGCAACAGTAATGCAAGAAAAGAGCTGTAA 786 0.4148 MGANFSSYDGDSAALGPWLGDIPEGCVALAFRDASFADFIWESKLPLNYKFIVEKALGDASVAELGKRDVYAALCRPNLFDNETKEIWLDKRTGGVCLAISSKALRITGIDDRRYWNHIATKESRFHTVAYLQQIWWLEVEGDIDFQFPHGTYSVFFRLYLGRSSKKLGRRVCKTEHIHGWDIKPVKFQLTTSDGQHAESHSHLDNPGHWVLYHAGNFVSKNSNDLMNIKFSLSQIDCTHTKGGLCVDSVLICNSNARKEL* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1956 261 PANTHER F-BOX PROTEIN PP2-A13 30 260 - -
Lja3g1956 261 PANTHER F-BOX PROTEIN PP2-A15 30 260 - -
Lja3g1956 261 Pfam Phloem protein 2 96 252 IPR025886 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1956 Lja-Chr3 22477170 22479419 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1956 - - lja:Lj0g3v0098299.1 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1956 3 22477170 22479419 Lja3g1956 3 22477170 22479419 ECH
Lja2g0016 2 132760 138152 Lja3g1956 3 22477170 22479419 ECH
Lja4g2417 4 27331121 27333128 Lja3g1956 3 22477170 22479419 ECH