Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0016 ATGGTCATGGGCATCGTCTTCTCTCGCCGACATGCTCACCAAGTCTCGCCGTCGTTTGGTGAATTGCCGGAGAGCTGCGTCGCTCTGATCCTCGGGTACGCCGATCCTCCTCAGATCTGCCAGCTCGCGACCTTGAACCGCGCCTTCCGTGCCGCTTCCTCTGCCGATTTTGTCTGGGAATCCAAGCTCCCCGCCAATTACCGTGCGATTGTCAGGAAAATCTTCACCGATTTTCCCTCCGATTCGAGCAAGAGAGACACTTACGCTGCCCTTTGCCGCCTCAATACTCTTGATGGAGGCACCAAGAAAGCTTGGTTGGATAAAAGCACGGGGAAGATTTGTATGTGCTTATCATTCAAGGGACTGTCCATAACCGGGATTGATGATCGGAGATATTGGAAGGATATCCACACTGAAGAGTCCAGATTCGGCACTGTCGCATACCTCCAGCAAACCTGGTGGTTTCAAGTGGATGGGGAAGTTGAGTTTCCATTTCCAGCAGGGACATACAGCTTATTCTTCAGACTTCATCTAGGGCGAGCCTCCAAAGGGAGGTTTGGTCGGCGGCTGTGCAACACTGAGCATGTTCATGGCTGGGACAAAAAGCCTGCACGGTTCGAGATTTGGACTTCAGATGACCAATATGTTACATCCGAGTGCTTTCTGAAAGAACCCGGCAAATGGTGTTTTTACCATGCCGGCGATTTCACGGTTCTGGATGGTGGTGATGCATCAACAAAAATCAAATTCTCTATGACTCAGATTGATTGCACTCACACTAAAGGTGGTCTGTGTATAGATTCTGTGTTTGTATACCCAAGTGAATTCAGAAAGGTTAAGGCATTTTTAAATTGCTCCTAA 861 0.4925 MVMGIVFSRRHAHQVSPSFGELPESCVALILGYADPPQICQLATLNRAFRAASSADFVWESKLPANYRAIVRKIFTDFPSDSSKRDTYAALCRLNTLDGGTKKAWLDKSTGKICMCLSFKGLSITGIDDRRYWKDIHTEESRFGTVAYLQQTWWFQVDGEVEFPFPAGTYSLFFRLHLGRASKGRFGRRLCNTEHVHGWDKKPARFEIWTSDDQYVTSECFLKEPGKWCFYHAGDFTVLDGGDASTKIKFSMTQIDCTHTKGGLCIDSVFVYPSEFRKVKAFLNCS* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0016 286 PANTHER F-BOX PROTEIN PP2-A15 8 281 - -
Lja2g0016 286 SUPERFAMILY F-box domain 13 93 IPR036047 GO:0005515
Lja2g0016 286 PANTHER F-BOX PROTEIN PP2-A12 8 281 - -
Lja2g0016 286 Pfam Phloem protein 2 112 273 IPR025886 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0016 Lja-Chr2 132760 138152 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0016 - - gmx:100788842 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0016 2 132760 138152 Lja2g0016 2 132760 138152 ECH
Lja2g0016 2 132760 138152 Lja3g1956 3 22477170 22479419 ECH