Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2417 ATGGGGATCTGGTTTTCTTCAACTCCTTCACCGGAGTCGGCATCCAAATCGAGTTTAGGCGAATTGCCGGAGTGCTGTGTGGCGGTGATGATGGGTTACATGGATCCGCCGCAGATTTGCAAGCTCGCCCTCATGAATCGCACTTTCCGCGGCGCTTCAATGGCGGATTTTGTCTGGGAATCCAAACTTCCGCCAAATTACCACCTTCTCCTCCGCCAAATCTTCGACGATTTTCCCTCCGATTTGGGGATGAGAGGGATTTATGCGCGCCTTTGCAGGGTCAATACTTTCGATGAAGGCACCAAGAAGGTTTGGTTGGATAGAAGCATGGGGAAGCTGTGTATGTCTATATCTGCAAAGGGGTTATCCATAACGGGGATTGATGATCGGAGATATTGGAACCATATCCCCACTGAAGAATCTAGATTCAGCTCTGTTGCATACCTCCAGCAAATCTGGTGGTTTGAAGTGGATGGAGAAGTTGAGTTCCCATTTCCACCTGGGACATACAGCTTGTTCTTCAGACTACATCTAGGGCGAGCCTCCAAGAGGTTCGGCCGACGTGTCTGCAACACAGAACATGTTCATGGCTGGGATGTAAAACCTGCGCGGTTCCAGCTCTGGACTTCAGATGGACAGTACGTTACATCTCAGTGTTTTCTGAAAGGACCAGGCAAGTGGCGCTATTACCATGCCGGAGATTTTGTGGTTGAGGATGGCAATGCGTCAACAAAAATCAAATTCTCCATGACTCAGATTGATTGCACACACACTAAAGGTGGTCTCTGTTTAGATTCTGTGCTGGTGTATCCAAGTGAATTCAGAAAGGTTAAAGCATTTTTGAACAACTCTTGA 855 0.4795 MGIWFSSTPSPESASKSSLGELPECCVAVMMGYMDPPQICKLALMNRTFRGASMADFVWESKLPPNYHLLLRQIFDDFPSDLGMRGIYARLCRVNTFDEGTKKVWLDRSMGKLCMSISAKGLSITGIDDRRYWNHIPTEESRFSSVAYLQQIWWFEVDGEVEFPFPPGTYSLFFRLHLGRASKRFGRRVCNTEHVHGWDVKPARFQLWTSDGQYVTSQCFLKGPGKWRYYHAGDFVVEDGNASTKIKFSMTQIDCTHTKGGLCLDSVLVYPSEFRKVKAFLNNS* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2417 284 Pfam Phloem protein 2 113 271 IPR025886 -
Lja4g2417 284 PANTHER F-BOX PROTEIN PP2-A15 1 279 - -
Lja4g2417 284 SUPERFAMILY F-box domain 10 94 IPR036047 GO:0005515
Lja4g2417 284 PANTHER F-BOX PROTEIN PP2-A12 1 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2417 Lja-Chr4 27331121 27333128 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2417 - - gmx:100788842 503.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2417 4 27331121 27333128 Lja4g2417 4 27331121 27333128 ECH
Lja4g2417 4 27331121 27333128 Lja3g1956 3 22477170 22479419 ECH