Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1914 ATGGCGGAGCTCCAAACTCAGGCGGTGGAAACCGTTCCCGTTCCGGCTCCGGCTCCGGTTCCGGTGGTGGAACCCGAGCCGCCGCTGGCTGAGGCGCCGGTGCTTGATGAAAAGAAACCGGTGCTGGCTCCACCGCCGCCACCTGCAGCAGATGAAACCAAGGCTCTTGCTGTTGTTGATAATGAGAAGATACCAGATCCAGTACCAAAGAAAACCTTAGGAGGATCCCTTGATAGAGATATTGCTCTTGCAGAAATAGAGAAAGAGAAAAGGTTGTCTAATGTGAAGGCATGGGAAGAAAGTGAGAAATCCAAAGCAGAGAATAAAGCCCAAAAGCAGCTCTCTGCTGTTGCTGCTTGGGAAAACAGCAAAAAGGCAGCTCTTGAAGCTAAGCTTAGAAAAATGGAGGAACAACTAGAGAAAAAAAAGGCTGAATATGGTGAAAAGATGAAAAACAAGATAGCCATGATTCACAAGCAAGCAGAGGAGAAGAGAGCTATGGTTGAAGCCAAGCGTGGTGAAGAAGTTCTCAAGGCAGAGGAAATAGCTGCAAGACATCGTGCAACTGGAAGCACTCCAAAGAAGCCCTTTGGATGTTTTTAA 603 0.4809 MAELQTQAVETVPVPAPAPVPVVEPEPPLAEAPVLDEKKPVLAPPPPPAADETKALAVVDNEKIPDPVPKKTLGGSLDRDIALAEIEKEKRLSNVKAWEESEKSKAENKAQKQLSAVAAWENSKKAALEAKLRKMEEQLEKKKAEYGEKMKNKIAMIHKQAEEKRAMVEAKRGEEVLKAEEIAARHRATGSTPKKPFGCF* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1914 200 Coils Coil 118 152 - -
Lja3g1914 200 MobiDBLite consensus disorder prediction 1 51 - -
Lja3g1914 200 Pfam Remorin, C-terminal region 90 195 IPR005516 -
Lja3g1914 200 Pfam Remorin, N-terminal region 37 86 IPR005518 -
Lja3g1914 200 PANTHER CARBOXY-TERMINAL REGION REMORIN 1 200 - -
Lja3g1914 200 PANTHER OS02G0117200 PROTEIN 1 200 - -
Lja3g1914 200 MobiDBLite consensus disorder prediction 14 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1914 Lja-Chr3 22062587 22065996 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1914 - - gmx:100802984 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1914 3 22062587 22065996 Lja5g0619 5 5556963 5560226 ECH
Lja3g1914 3 22062587 22065996 Lja3g1914 3 22062587 22065996 ECH
Lja4g0442 4 3610584 3612246 Lja3g1914 3 22062587 22065996 ECH
Lja1g3113 1 37997170 38001602 Lja3g1914 3 22062587 22065996 PCT