Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0619 ATGACAGAGGAACAACCAAAAAAGGTAGAATCTGAATCACCATCAAATCCTCCACCACCAGCTCCAGCTCCAACTGAGAGTACTCCTGCACCTGAAGCTGAAGCTAAACCAGAACCTGTGGTTCATGATGCTCCAAAGGAGGATGTGGCTGAGGAGAAATCTATAATTCCACAACCCTCTCCTCCAGAAAGCAAGCCTGTTGATGACTCCAAAGCTATTGTCAAAGTGGAGAAGACTCAAGAAGCTGCAGAAGAGAAACCACTTGAGGGCTCTATCAACCGAGATGCTGTGCTTACAAGAGTTGCAACTGAGAAGAGGCTGTCACTAATCAAAGCATGGGAAGAAAGTGAAAAGTCAATTGCAGATAACAAAGCTCACAAAAAGCTTTCAGATATTTCAGCATGGGAGAACAGCAAGATAGCTGCTAAGGAGGTTGAATTGAGAAAGATTGAGGAAAACCTGGAGAAGAAAAAGGCAGTATATGTAGAGAAACTGAAAAACAAAATAGCTATGGTCCACAGGGAAGCTGAAGAAAAGAGGGCATTTATTGAGGCCAAGAAAGGGGAAGATCTTCTGAAGGCAGAGGAGTTAGCTGCAAAATACAGGGCAACTGGAACAGCTCCCAAGAAACCCTTTAGTTTTTTCTAA 648 0.4352 MTEEQPKKVESESPSNPPPPAPAPTESTPAPEAEAKPEPVVHDAPKEDVAEEKSIIPQPSPPESKPVDDSKAIVKVEKTQEAAEEKPLEGSINRDAVLTRVATEKRLSLIKAWEESEKSIADNKAHKKLSDISAWENSKIAAKEVELRKIEENLEKKKAVYVEKLKNKIAMVHREAEEKRAFIEAKKGEDLLKAEELAAKYRATGTAPKKPFSFF* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0619 215 MobiDBLite consensus disorder prediction 1 72 - -
Lja5g0619 215 MobiDBLite consensus disorder prediction 12 27 - -
Lja5g0619 215 PANTHER REMORIN 1.4 1 215 - -
Lja5g0619 215 PANTHER OS02G0117200 PROTEIN 1 215 - -
Lja5g0619 215 MobiDBLite consensus disorder prediction 36 53 - -
Lja5g0619 215 Coils Coil 140 167 - -
Lja5g0619 215 Pfam Remorin, C-terminal region 105 210 IPR005516 -
Lja5g0619 215 Pfam Remorin, N-terminal region 47 101 IPR005518 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0619 Lja-Chr5 5556963 5560226 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0619 - - lja:Lj5g3v2013850.1 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1914 3 22062587 22065996 Lja5g0619 5 5556963 5560226 ECH
Lja4g0442 4 3610584 3612246 Lja5g0619 5 5556963 5560226 ECH
Lja5g0619 5 5556963 5560226 Lja5g0619 5 5556963 5560226 ECH