Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3113 ATGGCTGAGCTACAAAAGAAGGCGGAATCTGACACCACTCCGGCTCCAGTTGCTGCTGTGCCACCACCATCAAACGACGCCGTAGCCAAGAAAGCTCCGGAGGTGGCGGCAGATGATTCCAAAGCTCTTGTTGTTGTACCTGAGAAGACACCAGTTCCTGAAAACAAACCAAGCTCAAAAGGATCCCTCGATAGGGATGTTGCTCTGGCAGAATTAGAGAAAGAGAAAAGACTGTCTTATGTGAAGGCATGGGAAGAAAGTGAAAAAAGCAAAACAGAGAACAAAGCTCAAAAGAATCTCTCTGATGTTGTTGCATGGGAAAACAGTAAGAAGGCAGCTCTTGAAGCTCAACTGAGAAAAATTGAGGAACGATTGGAGAAAAAGAAAGCAGAATATGGTGAAAAAATGAAGAACAAGATAGCCTTAGTTCACAAGGAAGCAGAGGAGAGGAGAGCCATGATTGAAGCCAAGCGTGGTGAAGATCTTCTCAAGGCAGAGGAATTGGCTGCAAAGTTCCGTGCAACTGGAACCACTCCAAAGAAGCCAGTATTGGGATGCTTTTGA 564 0.4557 MAELQKKAESDTTPAPVAAVPPPSNDAVAKKAPEVAADDSKALVVVPEKTPVPENKPSSKGSLDRDVALAELEKEKRLSYVKAWEESEKSKTENKAQKNLSDVVAWENSKKAALEAQLRKIEERLEKKKAEYGEKMKNKIALVHKEAEERRAMIEAKRGEDLLKAEELAAKFRATGTTPKKPVLGCF* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3113 187 Coils Coil 104 138 - -
Lja1g3113 187 Pfam Remorin, N-terminal region 18 72 IPR005518 -
Lja1g3113 187 MobiDBLite consensus disorder prediction 1 67 - -
Lja1g3113 187 PANTHER CARBOXY-TERMINAL REGION REMORIN 1 187 - -
Lja1g3113 187 PANTHER OS02G0117200 PROTEIN 1 187 - -
Lja1g3113 187 Pfam Remorin, C-terminal region 76 181 IPR005516 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3113 Lja-Chr1 37997170 38001602 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3113 - - gmx:100305679 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3113 1 37997170 38001602 Lja3g1914 3 22062587 22065996 PCT