Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja3g1481 | ATGTCTGGAATTGTGGTGGTTTTTGACTTTGACAAGACCATTGTCGATTGTGACAGTGATAACTGGGTTGTTGACGAGTTGGGTTTCACCGATTTGTTTAATCAGCTCCTTCCCACCATGCCTTGGAACTCCCTTATGGACAGGATGATGATGGAGCTTCATTCAAAGGGTGTAACTATTAAGGAGATTGAAGAGGTTCTGCATAGGATTCCTATTCACCCCAGAGTAATACCTGCTATTAAAGCAGCTCATGCTTTAGGGTGCGATTTGAGGATTGTGAGTGATGCAAACGTGTTTTTCATTGAGACAATTTTGAAGCACTTAGGAATAAGGGAATATTTCTCAGAGATTAACACTAATCCTGGTTATCTTGATGGGGAAGGAAGGTTAAGAATTTTGCCTTACCATGACTTCAACAAGGCTCCTCATGGCTGCAGTTTGTGCCCACCAAACATGTGCAAGGGTTTAATCATGGATAGAATCCAAAATTCATTTTCTCAAGAGGATGACAAGAGAATCATCTATCTTGGTGATGGGGCTGGGGACTATTGCCCAAGCTTAAGGCTTAAACAGAGAGATTTCATGATGCCAAGGAAGAATTTTCCTGTGTGGGATTTAATATGCAAAGACCCTTCACTTCTTAAAGCTGAAATCCATGGCTGGAATGATGGAGAAGAGTTGGAGTTTGTTCTCTTGCAGTTGATCAACAAAATTTCTATGGAAAAAGGCGCTCAGTTCATATCATCTGATTGCAAAATACAGTCTCTCCCTATCTCTCCTTATGAGCCTTTGCCTAAAGTTGTTCATGTTCGACTATAA | 819 | 0.409 | MSGIVVVFDFDKTIVDCDSDNWVVDELGFTDLFNQLLPTMPWNSLMDRMMMELHSKGVTIKEIEEVLHRIPIHPRVIPAIKAAHALGCDLRIVSDANVFFIETILKHLGIREYFSEINTNPGYLDGEGRLRILPYHDFNKAPHGCSLCPPNMCKGLIMDRIQNSFSQEDDKRIIYLGDGAGDYCPSLRLKQRDFMMPRKNFPVWDLICKDPSLLKAEIHGWNDGEELEFVLLQLINKISMEKGAQFISSDCKIQSLPISPYEPLPKVVHVRL* | 273 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja3g1481 | 272 | PIRSF | PLP_phosphatas_PHOSPHO2 | 1 | 239 | IPR016965 | GO:0016791 | |
| Lja3g1481 | 272 | TIGRFAM | HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB | 5 | 187 | - | - | |
| Lja3g1481 | 272 | SUPERFAMILY | HAD-like | 4 | 190 | IPR036412 | - | |
| Lja3g1481 | 272 | PANTHER | INORGANIC PYROPHOSPHATASE | 1 | 271 | - | - | |
| Lja3g1481 | 272 | TIGRFAM | DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | 4 | 199 | IPR006384 | GO:0016791 | |
| Lja3g1481 | 272 | Gene3D | - | 2 | 188 | IPR023214 | - | |
| Lja3g1481 | 272 | Pfam | Putative Phosphatase | 4 | 235 | IPR016965 | GO:0016791 | |
| Lja3g1481 | 272 | PANTHER | PHOSPHATASE, ORPHAN 1, 2 | 1 | 271 | IPR016965 | GO:0016791 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lja3g1481 | Lja-Chr3 | 15808163 | 15809507 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lja3g1481 | K13248 | - | gmx:100785878 | 483.026 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lja3g1481 | 3 | 15808163 | 15809507 | Lja3g5050 | 3 | 92673205 | 92674494 | ECH | |
| Lja4g0270 | 4 | 2100942 | 2102797 | Lja3g1481 | 3 | 15808163 | 15809507 | ECH | |
| Lja3g1481 | 3 | 15808163 | 15809507 | Lja3g1481 | 3 | 15808163 | 15809507 | ECH | |
| Lja3g1481 | 3 | 15808163 | 15809507 | Lja3g5050 | 3 | 92673205 | 92674494 | PCT |