Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4117 ATGAAGCTTGCATTTGCAAATGTACTACTTGTTATGTGCCTTGTCCTTAGCTCCTCTTGGTTTGAAGTCTCAATGGCCAGTTCTTCTGGTTTCTGTGACACAAAGTGCGAGCAGAGGTGCTCCAAAGCTTCGATCCAGGACAGATGCTTGAAGTTCTGCGGGATCTGTTGTGACAAGTGCAAGTGTGTGCCATCTGGGACTTATGGGAACAAACATGAGTGTCCTTGCTACAGGGACTTGAAGAACTCCAAAGGCAAAAACAAATGCCCTTAA 273 0.4579 MKLAFANVLLVMCLVLSSSWFEVSMASSSGFCDTKCEQRCSKASIQDRCLKFCGICCDKCKCVPSGTYGNKHECPCYRDLKNSKGKNKCP* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4117 90 Pfam Gibberellin regulated protein 31 90 IPR003854 -
Lja1g4117 90 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 1 90 - -
Lja1g4117 90 PANTHER GIBBERELLIN REGULATED PROTEIN 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4117 Lja-Chr1 52234454 52234880 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4117 - - lja:Lj1g3v1708960.1 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4117 1 52234454 52234880 Lja5g0421 5 3718399 3719073 ECH
Lja1g4117 1 52234454 52234880 Lja1g4117 1 52234454 52234880 ECH
Lja5g3105 5 60722690 60724165 Lja1g4117 1 52234454 52234880 PCT