Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0421 ATGAAGCTTCCCTTTGCAACAATGCTACTCTGTTCCCTTCTTCTTAGCTCCTCTTTCTTGGAGCTAGCCATTGCCTATCAAGATTCACCGGATTGCAGCAAAAAATGCTCAGATAGGTGCTCTGTGGCACAAGTTCAAGACAGGTGCCTCAAGTACTGCGGAATTTGCTGCCAAGAGTGCAAGTGTGTTCCTTCTGGGACATATGGGAACAAGCACGAATGCCCTTGCTACAGGGACAAGCTTAACAACAAGGGCAAGCCCAAATGCCCTTGA 273 0.4799 MKLPFATMLLCSLLLSSSFLELAIAYQDSPDCSKKCSDRCSVAQVQDRCLKYCGICCQECKCVPSGTYGNKHECPCYRDKLNNKGKPKCP* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0421 90 Pfam Gibberellin regulated protein 31 90 IPR003854 -
Lja5g0421 90 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 1 90 - -
Lja5g0421 90 PANTHER PEAMACLEIN-LIKE 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0421 Lja-Chr5 3718399 3719073 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0421 - - vra:106771497 159.458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0421 5 3718399 3719073 Lja5g0421 5 3718399 3719073 ECH
Lja1g4117 1 52234454 52234880 Lja5g0421 5 3718399 3719073 ECH