Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3105 ATGAAGCAAGGATTTGCAGCTTTGCTACTTGTGTGCCTTGTCCTCAGTTCCTCTGTGTTTGAAGTGTCAATGGCTGCTTCTGGTGTGGTTAAGGAATCAGGTTTCTGTGGCTCCAAGTGTGCACAGAGGTGCTCTAAAGCTGGGATGCAGGACAGATGCATTAGGTTCTGTGGGATCTGCTGCGGCAAGTGCAAGTGTGTGCCATCTGGGACTTATGGGAACAAGCATGAATGCCCTTGCTACAGGGACATGAAGAACTCCAAGGGCAAGCCCAAGTGCCCTTAA 285 0.5018 MKQGFAALLLVCLVLSSSVFEVSMAASGVVKESGFCGSKCAQRCSKAGMQDRCIRFCGICCGKCKCVPSGTYGNKHECPCYRDMKNSKGKPKCP* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3105 94 Pfam Gibberellin regulated protein 35 94 IPR003854 -
Lja5g3105 94 PANTHER GIBBERELLIN REGULATED PROTEIN 1 94 - -
Lja5g3105 94 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3105 Lja-Chr5 60722690 60724165 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3105 - - gmx:100500113 157.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3105 5 60722690 60724165 Lja1g4117 1 52234454 52234880 PCT