Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1047 ATGGCCGTCGAATCTTTCCTCGGCAGAGTCCTCTTCGCCTCCGTCTTCATCCTCGCCGCGTACCAAGAATTTAATCAATATGGGGTTGATGGGGGACCTGCAGCAAAATCAATCAAGCCAAAGTTTGATGCCCTTATACATCAAGTACATTCTCATGTCAGCTTTCAGCTTCCAGGAATTGATATGAAATATATAGTTGCTGGTGCTATTGCTCTCAAGGGCATTGGAGGACTTCTTTTCATACTTGGCAGCTCTTTCGGAGCTTTCCTTCTGCTTTTGCATCAGATGATTGCTACTCCGATGTTGTATGATTTCTACAATTATGATGCTGATGACAAAGAGTTTACTCAACTATTCATCAAATTTACACAGCATATGGCTCTCTCAGGGGCCTTGTTATTTTTTATTGGGATGAAAAATTCCATTCCTAGAAGACAACCCAAGAAGAAGGCCCCCAAAACAAAAACCTATTAG 474 0.4198 MAVESFLGRVLFASVFILAAYQEFNQYGVDGGPAAKSIKPKFDALIHQVHSHVSFQLPGIDMKYIVAGAIALKGIGGLLFILGSSFGAFLLLLHQMIATPMLYDFYNYDADDKEFTQLFIKFTQHMALSGALLFFIGMKNSIPRRQPKKKAPKTKTY* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1047 157 PANTHER - 1 157 - -
Lja1g1047 157 PANTHER HR-LIKE LESION-INDUCING PROTEIN 1 157 - -
Lja1g1047 157 Pfam HR-like lesion-inducing 2 138 IPR008637 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1047 Lja-Chr1 10433622 10436409 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1047 - - gmx:100817488 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1047 1 10433622 10436409 Lja6g0066 6 1226637 1229748 PCT
Lja5g1873 5 22552507 22556363 Lja1g1047 1 10433622 10436409 PCT