Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0066 ATGGGCTTCGCTTCCTTTCTGGGTCGTCTCCTCTTTGCTTCCCTCTTCATCCTCTCCGCATGGCAGATGTATGTTGAATTTGATGCCAATGGTGGACCCATTGCTAAGGAGTTGATTCCCAAGCTCACTGTTCTAAAGAAAAATTTGTCCTCCAAATTGGGGGTAGGGCTACCAGATATTGATGAACAGCATTTTGTTGCAACAATCATATTTCTAAAGGGGCTTGGAGGGATTCTATTTGTGTTTGGCAGCACACTTGGAGCTTTTTTCTTGCTTCTGCATCAGGGGCTTACTACTCCACTTCTGCATGATTTCTATAACTATGGACCCAGCAAGCCTGAATATCATCTCTTGCTGAACGATTTCATGCTGAACACAGCAGTTTTTGGAGCATTGCTATTCTTTATAGGGATGAAGAACACAATTCCCAGGAGACAACTAAGGAAGAAGACCCCAAAAACAAAGACAGTTTAG 474 0.4325 MGFASFLGRLLFASLFILSAWQMYVEFDANGGPIAKELIPKLTVLKKNLSSKLGVGLPDIDEQHFVATIIFLKGLGGILFVFGSTLGAFFLLLHQGLTTPLLHDFYNYGPSKPEYHLLLNDFMLNTAVFGALLFFIGMKNTIPRRQLRKKTPKTKTV* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0066 157 PANTHER - 1 156 - -
Lja6g0066 157 PANTHER BNAA10G27800D PROTEIN 1 156 - -
Lja6g0066 157 Pfam HR-like lesion-inducing 1 138 IPR008637 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0066 Lja-Chr6 1226637 1229748 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0066 - - gmx:100786502 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0066 6 1226637 1229748 Lja6g0066 6 1226637 1229748 ECH
Lja1g1047 1 10433622 10436409 Lja6g0066 6 1226637 1229748 PCT