Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1873 ATGGCCTTCATCTCTTTCCTCGGCAGAGTCCTCTTCGCTTCCGTTTTCATCCTCTCTGCATACCAAGAATTCAATGAATTTGGAGTTGATGGTGGACCTGCTGCTAAATCACTCAGACCAAAGTTTGATACCTTTACATCTCGAGTCCATTCCCAAGTTGGCTTTCAACTTCCAGAGATTGATATCAAAGTTTTAATTGCTGGGGCTATTGCTCTGAAGGGTGTTGGAGGGCTTCTTTTCATATTTGGCAGCTCTTTTGGAGCTGTGCTGCTGCTCTTGCATCAGTTGATTGCTACTCCAATCCGCTATGATTTTTACAACTTTGACAATGAGGATAAAGAGTTTGCTCAACTTTTCATCAAATTTACACAGAATATGGCTCTTTTTGGGGCTCTTTTGTTTTTCATTGGCATGAAAAACTCCATTCCCAGAAGACAGCCCAAGAAGGCTCCAAAAACAAAAACCTATTAG 471 0.4161 MAFISFLGRVLFASVFILSAYQEFNEFGVDGGPAAKSLRPKFDTFTSRVHSQVGFQLPEIDIKVLIAGAIALKGVGGLLFIFGSSFGAVLLLLHQLIATPIRYDFYNFDNEDKEFAQLFIKFTQNMALFGALLFFIGMKNSIPRRQPKKAPKTKTY* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1873 156 Pfam HR-like lesion-inducing 1 138 IPR008637 -
Lja5g1873 156 PANTHER HR-LIKE LESION-INDUCING PROTEIN 1 156 - -
Lja5g1873 156 PANTHER - 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1873 Lja-Chr5 22552507 22556363 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1873 - - gmx:100305592 278.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1873 5 22552507 22556363 Lja1g1047 1 10433622 10436409 PCT