Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1021 ATGATAAGAGGAAGAGCAAATAGGAGCTCTAGAAAGAGGTTGGTTACAACTGTGTTGTGCTTGGTGATTGTTGGTGCTTTCTTCTACTTTCACTCTAAGAGTAGTAGTAGTGGCTCTTCTGCTGTTGAGTTTGGCAAAAGACACTTTGGTTGGGGAGAGGAAAAAGATGATGTTGAACTTGAATCTTCAACCATAACTGGAGAGGACAGTGCTGTTGTACCAAAGAGCTTTCCAGTATGTGATGATAGTTTATCTGAGCTGATTCCGTGCTTGGATAGAAACCTCATATACCAAACAAGATTGAAGCTTGATTTGTCTTTGATGGAGCACTATGAGAGACACTGCCCAATTCCTGAGAGGCGTTTTAATTGTTTAGTTCCTCCCCCTCCAGGGTACAAGACTCCAATCAAGTGGCCCAAAAGCAGAGACCAGGTATGGAAGGAAAATATACCTCACACCCATCTTGCAACTGAGAAATCAGACCAGAACTGGATGGTTGTAAAAGGTGAAAGAATTCTTTTTCCTGGTGGAGGAACCCACTTCCATTATGGTGCTGATAAGTATATTGCATCAATTGCTAATATGCTCAATTTTCCAAACAATATAAACAACGGAGGAAGACTCCGGTCTGTTCTTGATGTTGGATGTGGAGTTGCAAGCTTTGGAGGATATCTTCTTGCTTCTGATGTGATAGCAATGTCATTAGCACCAAATGATGTTCATCAAAACCAAATCCAGTTTGCTTTAGAGAGAGGGATACCGGCATATCTTGGTGTGTTAGGTACCCTGAGACTCCCTTACCCCAGTAGATCTTTTGAACTTGCTCATTGTTCTCGCTGTCGAATTGATTGGCTTCAGAGAGATGGCATGCTACTCCTTGAGTTGGATAGGCTACTCAGGCCAGGAGGTTACTTTGTATACTCATCTCCTGAAGCATATGAAACGGATGACGAGAATAGGAGAATATGGAGAAAAATGAGTGCTCTTGTTGAGCGGATGTGCTGGAAAATTGCTGCTAAGAAGGACCAGACTGTTATTTGGGTCAAGCCTTTGACAAATAACTGCTACTTAAAAAGAGAACCTGGTACTCAGCCTCCACTCTGCAGTTCTGATGATGATCCTGATGCAGTTTGGGGAGTTAAAATGGAAGCTTGCATTTCACGCTATTCTTCTCAAATGCACAAAGCAAAAGGAAGTGGCTTGGCTCCTTGGCCAGCTCGATTAACTACTCCACCTCCTCGTCTTGCAGAAATTGACTATTCTACTGAAATGTTTCAGAAGGACATGGAACTTTGGCAACAACAAGTTCATAATTACTGGAGCAAGCTAGGCAGTAAGATTAAGCCAGACACAATTCGGAATGTGATGGATATGAAGGCAAATTTGGGTTCATTTGCTTCTGCTTTGAAGGACAAAGATGTTTGGGTTATGAATGTGGTTCCAGAAGATGGGCAAAACACACTCAAGATAATATATGACAGAGGATTGATTGGAACAGTTCACAGCTGGTGTGAAGCTTTCTCAACCTACCCTAGAACTTATGATCTGCTCCATGCATGGACTGTGTTTTCTGATATTATTAAGAAAGATTGCAGTCCAGAGGATTTATTGATTGAGATGGATAGAATTCTGAGGCCAAAAGGTTTCATCATTGTCCATGATAAGAAGTCAGTGGTGGAGCTTATAAAGAAGTATTTGCCAGCATTACACTGGGAGGCAGTGACAATATATGATGTAGATCAAGGTGAGGAGGGAAATACGGTGTTAATAATTCAAAAAAAGATGTGGCTCATAAGTGATAGCATCCAGGTTTCAGAATGA 1821 0.4163 MIRGRANRSSRKRLVTTVLCLVIVGAFFYFHSKSSSSGSSAVEFGKRHFGWGEEKDDVELESSTITGEDSAVVPKSFPVCDDSLSELIPCLDRNLIYQTRLKLDLSLMEHYERHCPIPERRFNCLVPPPPGYKTPIKWPKSRDQVWKENIPHTHLATEKSDQNWMVVKGERILFPGGGTHFHYGADKYIASIANMLNFPNNINNGGRLRSVLDVGCGVASFGGYLLASDVIAMSLAPNDVHQNQIQFALERGIPAYLGVLGTLRLPYPSRSFELAHCSRCRIDWLQRDGMLLLELDRLLRPGGYFVYSSPEAYETDDENRRIWRKMSALVERMCWKIAAKKDQTVIWVKPLTNNCYLKREPGTQPPLCSSDDDPDAVWGVKMEACISRYSSQMHKAKGSGLAPWPARLTTPPPRLAEIDYSTEMFQKDMELWQQQVHNYWSKLGSKIKPDTIRNVMDMKANLGSFASALKDKDVWVMNVVPEDGQNTLKIIYDRGLIGTVHSWCEAFSTYPRTYDLLHAWTVFSDIIKKDCSPEDLLIEMDRILRPKGFIIVHDKKSVVELIKKYLPALHWEAVTIYDVDQGEEGNTVLIIQKKMWLISDSIQVSE* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1021 606 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 350 IPR029063 -
Lja1g1021 606 Gene3D Vaccinia Virus protein VP39 200 346 IPR029063 -
Lja1g1021 606 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 86 593 IPR004159 GO:0008168
Lja1g1021 606 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 417 576 IPR029063 -
Lja1g1021 606 PANTHER METHYLTRANSFERASE PMT1-RELATED 6 604 - -
Lja1g1021 606 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 6 604 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1021 Lja-Chr1 10121439 10126979 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1021 - - gmx:100805403 1050.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1021 1 10121439 10126979 Lja1g1021 1 10121439 10126979 ECH
Lja1g1021 1 10121439 10126979 Lja6g0049 6 927780 934494 PCT
Lja5g2069 5 27485057 27489618 Lja1g1021 1 10121439 10126979 PCT