Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0049 ATGTCGAGAGGCAGATCTGATGGATCGCAAAAGAAGCGCTTAGTTGCTTCCCTTTGTGCCGTGGCAATTTTTATTGGTTTTCTATATGTATACCAAGGATCCATCTTTGGTTCTCAAAACAGTGGTTCACCTGCACTTGAATATGGAAGCAAATCATTGAAAAGACTTGGGGCATCATATTTGGGTGCAGATGAGGATGCTGCAGATGGAAAGCAAGATGAATCTTCATCAAGTTTTGCACAGGGAGATGGGGAGGGTGATATTGTACCGAAGAGTTACCCCGTTTGTGATGATCGTCATTCAGAGTTGATTCCCTGCTTAGACAGACATTTTATCTATCAAATGAGACTGAAGCTGGATCTTTCTTTGATGGAACACTATGAGAGACATTGCCCTCCTGCCGAAAGGCGGTTCAATTGCTTGATTCCTCCCCCGCCAGGATACAAGGTCCCTATTAAGTGGCCTCAGAGCAGAGATGAGGTGTGGAAAGCTAATATACCACATACTCACCTTGCAACTGAGAAGTCTGACCAGAACTGGATGATTGTAAAAGGTGAAAAGATATTCTTCCCTGGAGGGGGTACTCATTTCCACTATGGAGCTGATAAGTACATTGCATCAATTGCAAAGATGCTCAACTTCTCCAAAAATAATCTTAACAATGAAGGAAGACTGCGGACAGTGCTTGATGTTGGCTGTGGAGTTGCTAGTTTTGGAGCTTATCTTCTTTCATCTAATATCATTGCAATGTCTTTGGCACCCAACGATGTGCATCAGAATCAGATTCAATTTGCTCTAGAAAGAGGAATTCCTGCATATCTTGGTGTCTTGGGAACTAAGAGACTTCCTTACCCAAGCAGATCTTTTGAACTTGCACACTGTTCTCGCTGCCGGATTGATTGGATTCAAAGAGATGGAATACTTCTCCTTGAGCTAGACCGGTTGCTTCGGCCGGGAGGTTATTTTGCATACTCGTCTCCAGAAGCATATGCTCAGGATGAAGAGGATCTAAGGATATGGAGAGAAATGAGTGCCCTTGTGGGACGTATGTGTTGGAGAATTGCTTCAAAGAGGGACCAAACTGTCATCTGGCAGAAGCCTCTGACAAATGATTGCTACATGGAAAGAGAACCCGGTACTCGCCCTCCTCTATGCCAGTCTGATGATGATCCAGATGCTGTTTGGGGAGTGAACATGGAAACTTGCATCACTCCTTACTCTGAACATGACCACAGAGCCAAGGGTAGTGAGTTAGCTCCATGGCCTGCAAGATTGACCAGTCCTCCTCCTAGATTAGCTGACCTCGGCTATTCAAATGAAATGTTTGAAAAGGACACGGAGTTATGGCAAGGAAGAGTTGATAATTACTTCAATCTCTTGAGTCCAAAAATCTCGTCAAACACGCTGCGGAATGTGATGGATATGAAAGCACACATGGGTTCATTTGCAGCTGCTCTTAAAGACAAGGATGTTTGGGTGATGAATGTTGTACCTCATGATGGACCAAGCACACTTAAACTGATATATGACCGAGGCCTCATAGGGAGCACCCATGACTGGTGTGAAGCATATTCAACATACCCCAGGACTTATGATTTGCTCCATGCATGGACTGTTTTCTCTGACTTGGAAAAGAAAGAGTGCAGCGCAGAGGATCTATTGCTTGAGATGGACCGCATGCTCAGGCCTACTGGTTTCATAATCATCAGGGACAAACAACATGTGATTGATTTTGTGAAGAAGTACCTCACAGCAATGCACTGGGAAGCAGTTGCAACTGCAGATTCCAGTTCTGACTCTGAACAGGATAGCAATGAAGTTGTTCTTGTTGTCCAGAAGAAATTGTGGCTCACCACTGAAAGCTTTAGGGATACAGAATAG 1881 0.4428 MSRGRSDGSQKKRLVASLCAVAIFIGFLYVYQGSIFGSQNSGSPALEYGSKSLKRLGASYLGADEDAADGKQDESSSSFAQGDGEGDIVPKSYPVCDDRHSELIPCLDRHFIYQMRLKLDLSLMEHYERHCPPAERRFNCLIPPPPGYKVPIKWPQSRDEVWKANIPHTHLATEKSDQNWMIVKGEKIFFPGGGTHFHYGADKYIASIAKMLNFSKNNLNNEGRLRTVLDVGCGVASFGAYLLSSNIIAMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWIQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWREMSALVGRMCWRIASKRDQTVIWQKPLTNDCYMEREPGTRPPLCQSDDDPDAVWGVNMETCITPYSEHDHRAKGSELAPWPARLTSPPPRLADLGYSNEMFEKDTELWQGRVDNYFNLLSPKISSNTLRNVMDMKAHMGSFAAALKDKDVWVMNVVPHDGPSTLKLIYDRGLIGSTHDWCEAYSTYPRTYDLLHAWTVFSDLEKKECSAEDLLLEMDRMLRPTGFIIIRDKQHVIDFVKKYLTAMHWEAVATADSSSDSEQDSNEVVLVVQKKLWLTTESFRDTE* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0049 626 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 1 624 - -
Lja6g0049 626 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 368 IPR029063 -
Lja6g0049 626 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 433 582 IPR029063 -
Lja6g0049 626 MobiDBLite consensus disorder prediction 65 86 - -
Lja6g0049 626 Gene3D Vaccinia Virus protein VP39 216 364 IPR029063 -
Lja6g0049 626 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 102 613 IPR004159 GO:0008168
Lja6g0049 626 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 1 624 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0049 Lja-Chr6 927780 934494 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0049 - - gmx:100780043 1173.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0049 6 927780 934494 Lja6g0049 6 927780 934494 ECH
Lja1g1021 1 10121439 10126979 Lja6g0049 6 927780 934494 PCT