Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2069 ATGGCTAGAGGAAGAGTAGATGGGAACCCGAGAAAGCGGTTGATCATAACTGTGTTGGTTTTATTGATTGTTGGTGTTTTATTTTACCTGTATTCTCGTAGTAGTGACTCATCTTCTATTGAGTATGGTAGCAAATCTTTGAAAACTGGTGGAGAAGATGATAGTTCTATACCAAAGACCATTCCAGTATGTGATGATCGTCTCTCTGAGCTAATTCCCTGTCTAGATAGAAATCTCATATATCAAACAAGATTGAAGCTTGATCTGACATTGATGGAGCATTATGAGCGACATTGCCCAATGCCTGAGAGGCGTTATAATTGTTTGATTCCGCCTCCTCCAGGGTACAAGATTCCAATCAAGTGGCCCAAAAGCAGAGATCAGGTGTGGAAGGCAAATATACCTCATACTCATCTTGCAACTGAGAAATCTGACCAGAACTGGATGGTTGTAAAAGGTGAAAAGATAGTTTTTCCTGGTGGAGGAACCCACTTCCATTACGGTGCTGATAAATATATTGCATCAATTGCCAATATGCTCAATTTTCCGAACAATGTTATAAACAACGGAGGAAGACTCCGTAGTGTTCTTGATGTTGGCTGTGGTGTTGCAAGCTTTGGAGGATACCTTCTTTCTTCTGATGTAGTTGCAATGTCATTAGCGCCAAATGATGTTCATGAAAACCAAATCCAGTTTGCTTTAGAGAGAGGGATTCCAGCATATCTTGGTGTATTAGGGACTCTAAGACTTCCTTATCCCAGTAGATCGTTTGAACTTGCTCATTGTTCTCGCTGTAGAATTGATTGGCTTCAAAGGGATGGCATACTTCTTCTTGAGCTGGACAGGTTACTCAGGCCAGGAGGCTACTTTGCTTACTCATCTCCCGAAGCCTATGCTCAAGATGAAGAGGATCGGAGAATATGGAGAGAAATGAACGCTCTTGTGGAGCGGATGTGTTGGAAAATAGCTTCAAAGAAGAACCAGACTGTTATATGGGTTAAGCCTCTTACAAATGATTGTTACTTGAAAAGAGAGCCTGATACACAGCCTCCACTCTGCAGTTCTGATGATGATCCTGATGCTGTTTGGGGAGTTAAAATGAAAGCTTGCATCTCGCGTTACTCTAATCAGATGCACAGAGCAAAAGGAACTGGTTTGTCTCCTTGGCCAGCTCGATTGACTACTCCACCTCCTCGTCTTGCCGACTTTAACTATTCGAGTGAAATGTTTCAAAAGGACATGGATGCTTGGCAACAACGGGTTGATAACTATTGGAAAATGCTAGGCAATAAAATTAAGCCTGACACAGTTAGAAATGTGATGGACATGAACGCAAATTTGGGTTCATTTGCAGCTGCTTTGAAGGATAAAGATGTTTGGGTGATGAATGTTGTGCCAGAAAATGGGCCAAACACACTCAAGATCATTTATGATAGAGGACTATTAGGAACAGTTCACAACTGGTGTGAAGCATTTTCAACCTACCCTCGCACTTATGATCTTCTCCATGCATGGGCCATATTTTCTGCTATCATTGAGAAAGAGTGCAGTCGAGAGGATTTATTGATTGAGATGGATAGAATCCTCCGACCAAAAGGTTTCGTCATTGTCCACGATAAGCGGTCGGTGGTATTGTCTATAAAGAAGTTCTTGCCAGCATTGCACTGGCAAGCAGTGGCCAAATTTAACGTTGAGGAAGGTTCAGGTCAAGATGAGGATGATGCAGTGTTAATAATTCAGAAGAAGATTTGGCTCACAAGTGAGAGTATCCGAGCCGCAGAAGAATGA 1788 0.4206 MARGRVDGNPRKRLIITVLVLLIVGVLFYLYSRSSDSSSIEYGSKSLKTGGEDDSSIPKTIPVCDDRLSELIPCLDRNLIYQTRLKLDLTLMEHYERHCPMPERRYNCLIPPPPGYKIPIKWPKSRDQVWKANIPHTHLATEKSDQNWMVVKGEKIVFPGGGTHFHYGADKYIASIANMLNFPNNVINNGGRLRSVLDVGCGVASFGGYLLSSDVVAMSLAPNDVHENQIQFALERGIPAYLGVLGTLRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDRRIWREMNALVERMCWKIASKKNQTVIWVKPLTNDCYLKREPDTQPPLCSSDDDPDAVWGVKMKACISRYSNQMHRAKGTGLSPWPARLTTPPPRLADFNYSSEMFQKDMDAWQQRVDNYWKMLGNKIKPDTVRNVMDMNANLGSFAAALKDKDVWVMNVVPENGPNTLKIIYDRGLLGTVHNWCEAFSTYPRTYDLLHAWAIFSAIIEKECSREDLLIEMDRILRPKGFVIVHDKRSVVLSIKKFLPALHWQAVAKFNVEEGSGQDEDDAVLIIQKKIWLTSESIRAAEE* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2069 595 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 52 592 IPR004159 GO:0008168
Lja5g2069 595 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 2 49 IPR004159 GO:0008168
Lja5g2069 595 PANTHER METHYLTRANSFERASE PMT3-RELATED 2 49 - -
Lja5g2069 595 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 70 581 IPR004159 GO:0008168
Lja5g2069 595 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 108 329 IPR029063 -
Lja5g2069 595 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 371 539 IPR029063 -
Lja5g2069 595 PANTHER METHYLTRANSFERASE PMT3-RELATED 52 592 - -
Lja5g2069 595 Gene3D Vaccinia Virus protein VP39 184 333 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2069 Lja-Chr5 27485057 27489618 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2069 - - gmx:100784179 1080.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2069 5 27485057 27489618 Lja5g2069 5 27485057 27489618 ECH
Lja5g2069 5 27485057 27489618 Lja1g1021 1 10121439 10126979 PCT