Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0733 ATGCAGGGTGGTGGTGAACAACAGAACAACCAGTTGGTGGTGCAGAACTCAGGGAGTCTCAGCTTCAGCAGCCAAATGTCCAAGGAAGATGAGGAGATGTCAAGGTCTGCTCTTTCCAATTTCAAGGCCAAGGAGGAAGAGATTGAGAGGAAGAAGATGGAGGTTAGAGAGAAGGTTCAGCTCCAGTTGGGTCGGGTTGAAGAAGAAACCAAACGTCTTGCTACCATTCGTGAGGAGCTTGAATCCCTAGCTGATCCAATGAGGAAGGAAGTTGCAATTGTCCGAAAAAGGATTGATTCTGTAAACAAGGAATTAAAGCCACTAGGTCATACCTGCCAGAAGAAGGAGAAAGAATACAAAGACGCCCTTGAAGCTTTTAATGAAAAGAACAGGGAAAAAGTACAGCTAATCACCAGGCTAATGGAGGTGAGTGACCTGGTGAGTGAAAGTGAAAGATTGAGGATGAAGAAGCTGGAGGAGCTGAGTAAGAACATAGATTCCTTGAAATGA 510 0.451 MQGGGEQQNNQLVVQNSGSLSFSSQMSKEDEEMSRSALSNFKAKEEEIERKKMEVREKVQLQLGRVEEETKRLATIREELESLADPMRKEVAIVRKRIDSVNKELKPLGHTCQKKEKEYKDALEAFNEKNREKVQLITRLMEVSDLVSESERLRMKKLEELSKNIDSLK* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0733 169 MobiDBLite consensus disorder prediction 1 47 - -
Lja1g0733 169 Coils Coil 112 132 - -
Lja1g0733 169 PANTHER RAB6-INTERACTING PROTEIN GORAB 8 167 IPR007033 -
Lja1g0733 169 MobiDBLite consensus disorder prediction 1 27 - -
Lja1g0733 169 PANTHER EXPRESSED PROTEIN 8 167 - -
Lja1g0733 169 Coils Coil 38 58 - -
Lja1g0733 169 Pfam Transcriptional activator 15 167 IPR007033 -
Lja1g0733 169 MobiDBLite consensus disorder prediction 28 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0733 Lja-Chr1 7076368 7078664 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0733 - - gmx:100499923 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0971 5 9504176 9505742 Lja1g0733 1 7076368 7078664 ECH
Lja1g0733 1 7076368 7078664 Lja5g0971 5 9504176 9505742 ECH
Lja1g0733 1 7076368 7078664 Lja1g0733 1 7076368 7078664 ECH
Lja1g0733 1 7076368 7078664 Lja3g3613 3 71580414 71583192 ECH