Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3613 ATGGCAACACCAAAACGGTCATACTCATATGATCTTCAGCAGCAACAACACCCAAATGTGCAGCAAGTGAAGAACTCAGGAATGATTAGCAGCGACCAGAGCCCAAGAATAGATGATAAGGAAGAGGAGATGTCAAGATCAGCTCTAGCAATGTTCCGAGCAAAGGAAGAAGAAATTGAGAGGAGAAAAATGGAGGTCAGGGACAAGGTTCATGCTCATCTTGGTCGAGTTGAAACTGAAACAAAGCGCTTGGCTGAGATTCGAGAAGAGCTTGAGGGTTTCACAGATCCAATGAGGAAGGAAGTTGGAATAGTTCGAAAGAAGATAGACATGGTTAACAAGGAGTTGAAGCCACTGGGCCAAACATGCCAGAAAAAGGAGAGAGAATACCATGAAGCACTAGAGGCATTCAATGACAAAAACAGAGAAAAAGCTCAACTTGTAACCAAGTTAGTGGAGCTGGTGACTGAAAGTGAGAGGTTGAGGATGAAGAAGCTGGATGAGCTAAGCAAAAACATTGATACCCTGCATTGA 534 0.4363 MATPKRSYSYDLQQQQHPNVQQVKNSGMISSDQSPRIDDKEEEMSRSALAMFRAKEEEIERRKMEVRDKVHAHLGRVETETKRLAEIREELEGFTDPMRKEVGIVRKKIDMVNKELKPLGQTCQKKEREYHEALEAFNDKNREKAQLVTKLVELVTESERLRMKKLDELSKNIDTLH* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3613 177 PANTHER - 11 176 - -
Lja3g3613 177 MobiDBLite consensus disorder prediction 1 46 - -
Lja3g3613 177 Pfam Transcriptional activator 24 175 IPR007033 -
Lja3g3613 177 MobiDBLite consensus disorder prediction 1 33 - -
Lja3g3613 177 PANTHER RAB6-INTERACTING PROTEIN GORAB 11 176 IPR007033 -
Lja3g3613 177 Coils Coil 123 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3613 Lja-Chr3 71580414 71583192 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3613 - - ccaj:109798987 289.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3613 3 71580414 71583192 Lja3g3613 3 71580414 71583192 ECH
Lja1g0733 1 7076368 7078664 Lja3g3613 3 71580414 71583192 ECH