Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0971 ATGTGCCTAGTTTGCAGGAACAGAGACAAAATGCAGAAAATGAAGAACCTTGGGAGTGTTGGAAGCAGTGGGAGGCTATCAACAGAAGAGCATGAGGATGAGGAGGTTTCGAAATTGGCCATTTCCTCATTCCAAGCCAAGGAAGAAGAGATTGAGAGGAAAAAGATGGAGGTGAAAGAGAGAGTTGAGCTTCAACTTGGACGTGCTGAAGAAGAGACAAGGCGTTTGTCACATATTTGGGAAGAGCTTGAAGTAATGGAAGATCCTTTGAGGAAGGAAGTTGCAATGGTACGCAAGAAGATTGACTTGGCTATCAAAGATTTAAAGCCACTAGGGCAGAACTACCAGAAAAAGGAGAAAGAGTATAAAGAAGCATTGGAAGCTTTCAATGAAAAGAACAAAGAGAAGGCTCATCTGGTAGCCTCATTAATTGAGCTGCTGACTGAGAGTGAAAGACTGAGGATGAAGAAACTGGGGGACCTATGCAACACTGTAGAGTCTCTGTCACTGAAACAATAA 519 0.4297 MCLVCRNRDKMQKMKNLGSVGSSGRLSTEEHEDEEVSKLAISSFQAKEEEIERKKMEVKERVELQLGRAEEETRRLSHIWEELEVMEDPLRKEVAMVRKKIDLAIKDLKPLGQNYQKKEKEYKEALEAFNEKNKEKAHLVASLIELLTESERLRMKKLGDLCNTVESLSLKQ* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0971 172 PANTHER RAB6-INTERACTING GOLGIN (DUF662) 11 167 - -
Lja5g0971 172 PANTHER RAB6-INTERACTING PROTEIN GORAB 11 167 IPR007033 -
Lja5g0971 172 Coils Coil 41 61 - -
Lja5g0971 172 Pfam Transcriptional activator 15 167 IPR007033 -
Lja5g0971 172 Coils Coil 112 135 - -
Lja5g0971 172 MobiDBLite consensus disorder prediction 14 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0971 Lja-Chr5 9504176 9505742 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0971 - - gmx:100794044 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0971 5 9504176 9505742 Lja1g0733 1 7076368 7078664 ECH
Lja1g0733 1 7076368 7078664 Lja5g0971 5 9504176 9505742 ECH
Lja5g0971 5 9504176 9505742 Lja5g0971 5 9504176 9505742 ECH