Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0384 ATGATGATGGTGATGGTGAGATCTTCAATCATCATATTGGTGGTTTCCATTTTGATATGTGTGACAGTTGCTGCAGTTGCAGAGAAACAAGAGAACAAGTTGTTGACGGTGTACGAGGTTCTTGAGTCTTATGATTTTCCGGTGGGGCTTCTTCCAAAAGGTGCGACGGGGTACGAGCTAGATGAAAGGAGTGGGAAGTTCACGGTGTATTTTGAGGGAACCTGCATCTTCGGGATCAAGTCTTACGATCTCAGGTACAAGTCCATGATCAAGGGAGTGATCTCCAGAGGGAAGCTTGCGAAGCTGAGGGGAATCAGCGTGAAGATTGAGCTGGTTTGGCTCAGAATCACCGAGGTTACCCGCGACGGCGATGACATCCATTTCTATGTTGGTGTTGCTTCAGCTGATTTTGGTGTTGATAGCTTTCTGGAAAGCCCTCAGTGTGGATGTGGATTCAATTGCAATGGTTTCCGTAGAAATGGTAGTCTTTCTTCTGTTTAG 501 0.4631 MMMVMVRSSIIILVVSILICVTVAAVAEKQENKLLTVYEVLESYDFPVGLLPKGATGYELDERSGKFTVYFEGTCIFGIKSYDLRYKSMIKGVISRGKLAKLRGISVKIELVWLRITEVTRDGDDIHFYVGVASADFGVDSFLESPQCGCGFNCNGFRRNGSLSSV* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0384 166 Gene3D - 21 145 IPR036758 -
Lja1g0384 166 PANTHER T31J12.3 PROTEIN-RELATED 17 160 IPR007493 -
Lja1g0384 166 SUPERFAMILY At5g01610-like 10 154 IPR036758 -
Lja1g0384 166 Pfam Protein of unknown function, DUF538 37 142 IPR007493 -
Lja1g0384 166 PANTHER DUF538 FAMILY PROTEIN 17 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0384 Lja-Chr1 3356984 3357816 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0384 - - lja:Lj2g3v0593030.1 307.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0384 1 3356984 3357816 Lja1g0384 1 3356984 3357816 ECH
Lja1g0384 1 3356984 3357816 Lja5g1180 5 11851445 11852343 ECH
Lja1g0384 1 3356984 3357816 Lja5g1182 5 11867965 11868780 PCT