Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0335 ATGGACAAGGTGATGAGGTTGGCTTCTGAAAAGGGTGTTGTGATTTTCACAAAGAGCTCTTGTTGCCTCTGCTACGCGGTCAACATTCTGTTTCAAGAAATTGGGGTGAGGCCAGTGGTTCATGAAATTGACCAGGACCCTGAAGGCAGGGAAATGGAGAAAGCTCTATTGAGGCTCGGCTGCCCCGTGCCTGTCCCGGCAGTGTTCATAGGAGGGAAGCTAATGGGATCCACCAATGAAATCATGTCCCTCCACCTTAGCGGTTCGCTGACTCAGTTGCTGAAACCATATCAATCTTGA 300 0.4967 MDKVMRLASEKGVVIFTKSSCCLCYAVNILFQEIGVRPVVHEIDQDPEGREMEKALLRLGCPVPVPAVFIGGKLMGSTNEIMSLHLSGSLTQLLKPYQS* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0335 99 CDD GRX_GRXh_1_2_like 13 93 - -
Lja1g0335 99 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 98 - -
Lja1g0335 99 PANTHER GLUTAREDOXIN 1 98 IPR011905 -
Lja1g0335 99 SUPERFAMILY Thioredoxin-like 1 97 IPR036249 -
Lja1g0335 99 Pfam Glutaredoxin 13 74 IPR002109 -
Lja1g0335 99 Gene3D Glutaredoxin 1 99 - -
Lja1g0335 99 ProSiteProfiles Glutaredoxin domain profile. 1 99 - -
Lja1g0335 99 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 97 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0335 Lja-Chr1 2931644 2932372 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0335 1 95 Miscellaneous Gene Families AT4G15670 48.421 4.15e-32 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0335 K03676 - gmx:100499748 187.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0335 1 2931644 2932372 Lja1g0335 1 2931644 2932372 ECH
Lja1g0335 1 2931644 2932372 Lja5g1141 5 11503244 11503552 PCT
Lja5g1139 5 11476356 11476840 Lja1g0335 1 2931644 2932372 PCT