Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1398 ATGGATCCGAACACAGTGAAGTCGACTCTGTCTAATTTGGCTTACGGAAATGTTATGGCAGCAGCTGCCCGTGATTATCAAAAGGAATTGCTTGCTCAAAATAAGGCGCAGGCTTCAAGTTCTGTAAACCAGGAAGTTAATCTTGATGAGTTAATGGATGACCCGGAGTTGGAAAAATTGCATGCAGATAGAATTGCAGCTCTTAAGAAAGAAGCAGAGAAACGAGAGGCATGGAAAAAGAAAGGTCATGGAGAATACAGGGAGATAACCGAGGGGGATTTCTTGGGTGAAGTCACTGGTAGTGAAAAAGTTATATGTCACTTCTATCATAAGGAGTTTTATCGATGCAAGATAATGGATAAGCATTTAAAATCCCTTGCACCAGAGCATGTTGATACGAAGTTCATTAAGCTTGATGCAGAGAATGCACCCTTCTTTGTTGCAAAACTGGCAGTCAAGACTTTGCCATGCGTCCTACTGTTCAGACAAGGGATTGCAGTGGATAGATTAGTAGGGTTTCAAGATCTGGGAGGGAAAGATGATTTTACCACAAAAACGCTGGAGGGTCTGCTGATAAAGAAAGGCATGATTAGCGAGAAAAGAGACGAGGATGACGAAAATGATGGAGATCATGAAGATTCAAGTAGAAAAGTCAGATCCTTCGTTGTTGCTGATTCTGATTCTGATTAA 690 0.4145 MDPNTVKSTLSNLAYGNVMAAAARDYQKELLAQNKAQASSSVNQEVNLDELMDDPELEKLHADRIAALKKEAEKREAWKKKGHGEYREITEGDFLGEVTGSEKVICHFYHKEFYRCKIMDKHLKSLAPEHVDTKFIKLDAENAPFFVAKLAVKTLPCVLLFRQGIAVDRLVGFQDLGGKDDFTTKTLEGLLIKKGMISEKRDEDDENDGDHEDSSRKVRSFVVADSDSD 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1398 229 Pfam Thioredoxin 88 174 IPR013766 -
Lele56g1398 229 Gene3D Glutaredoxin 76 210 - -
Lele56g1398 229 MobiDBLite consensus disorder prediction 198 229 - -
Lele56g1398 229 SUPERFAMILY Thioredoxin-like 43 198 IPR036249 -
Lele56g1398 229 CDD Phd_like_TxnDC9 81 191 - -
Lele56g1398 229 PANTHER THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 1 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1398 Lele-ChrLele56 17055915 17059487 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele56g1398 56 17055915 17059487 Lele56g1398 56 17055915 17059487 ECH
Lele53g0035 53 290780 295616 Lele56g1398 56 17055915 17059487 hybridization
Lele54g0030 54 300498 304106 Lele56g1398 56 17055915 17059487 hybridization