Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0030 ATGGATCCGAACACAGTGAAGTCGACTCTGTCTAATTTGGCTTACGGAAATGTTATGGCAGCCGCTGCCCGTGATTATCAAAAGGAATTGCTTGCTCAAAATAAGGCGCAGGCTTCAAGTTCTGTAAACCAGGAAGTTGATCTTGATGAGTTAATGGATGACCCGGAGTTGGAAAAATTGCATGCAGATAGAATTGCAGCTCTTAAGGTGAAAGATGCAGAGAAACGAGAGGCATGGAAGAAGAAAGGTCATGGAGAATACAGGGAGATAACCGAGGGGGATTTCTTAGGTGAAGTCACTGGTAGTGAAAAAGTTATATGTCACTTCTATCATAAGGAGTTTTATCGATGCAAGATAATGGATAAGCATTTAAAATCCCTTGCACCAGAGCATGTTGATACGAAGTTCATTAAGCTTGATGCAGAGAATGCACCCTTCTTTGTTGCAAAACTGGCAGTCAAGACTTTGCCATGCGTCATACTGTTCAGACAAGGGATTGCAGTGGATAGATTAGTAGGGTTTCAAGATCTGGGAGGGAAAGATGATTTTACCACAAAAACGCTGGAGGGTCTGCTGATAAAGAAAGGCATAATTAGCGAGAAAAGAGACGAGGATGACGAAAATAATGGAGATCATGAAGATTCAAGTAGAAAAGTCAGATCCTCTGTTGTTGCTGATTCTGATTCTGATTAA 693 0.4141 MDPNTVKSTLSNLAYGNVMAAAARDYQKELLAQNKAQASSSVNQEVDLDELMDDPELEKLHADRIAALKVKDAEKREAWKKKGHGEYREITEGDFLGEVTGSEKVICHFYHKEFYRCKIMDKHLKSLAPEHVDTKFIKLDAENAPFFVAKLAVKTLPCVILFRQGIAVDRLVGFQDLGGKDDFTTKTLEGLLIKKGIISEKRDEDDENNGDHEDSSRKVRSSVVADSDSD 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0030 230 MobiDBLite consensus disorder prediction 202 230 - -
Lele54g0030 230 SUPERFAMILY Thioredoxin-like 42 200 IPR036249 -
Lele54g0030 230 CDD Phd_like_TxnDC9 82 192 - -
Lele54g0030 230 Gene3D Glutaredoxin 77 211 - -
Lele54g0030 230 PANTHER THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 1 230 - -
Lele54g0030 230 Pfam Thioredoxin 89 175 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0030 Lele-ChrLele54 300498 304106 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0030 54 300498 304106 Lele54g0030 54 300498 304106 ECH
Lele54g0030 54 300498 304106 Lele55g1462 55 20788105 20791864 hybridization
Lele54g0030 54 300498 304106 Lele56g1398 56 17055915 17059487 hybridization