Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0035 ATGGAGGTAACTCGTGCTACGCATGAACGGAGGAGGGATGGGAGACACCAGCTACGCAAACAATTCCTTTGTTCAGACCTGGGTTGCTCTTCTGGTCCAACCACTTTCTTTGTGGTTTCTGAAGTAATCAAAACGGTGGAGAAGCTTTGCCGAGAGCTAAATCATGAGTCTCCAGAATACCAAGTTTTTGAGATGGATCCGAACACAGTGAAGTCGACTCTGTCTAATCTGGCATTCGGAAATGTTATGGCAGCCGCTGCCCGTGATTATCAAAAGGAATTGCTTGCTCAAAACAAGGCGCAGACTTCAAGTTCTGTAAACCAGGAAGTTGATCTTGATGAGTTAATGGATGACCCAGAGTTGGAAAAATTGCATGCAGATAGAATTGCAGCTCTTAAGAAAGAAGCAGAGAAACGAGAGGCATGGAAGAAGAAAGGTCATGGGGAATACAGGGAGATAACTGAGGGTGATTTCTTAGGTGAAGTTACTGGGAGTGAAAAAGTTATATGTCACTTCTATCATAAGGAGTTTTATCGATGCAAGATAATGGATAAGCATTTAAAATCCCTTGCACCAGAGCATGTTGATACGAAGTTCATTAAGCTTGATGCAGAGAATGCACCCTTCTTTGTTGCAAAACTGACTGTCAAGACTTTGCCATGCGTCATACTGTTCAGACAAGGGATTGCAGTGGATAGATTAGTAGGGTTTCAAGATCTGGGAGGGAAAGATGATTTTACCACAAAAACGCTGGAGGTTCTGCTGATAAAGAAAGGCATTATTAACGAGAAAAGAGATGAGGATGACGAAAATGATGGCTATCATGAAGATTCAAGTAGAAAAATCAGATCCTCCGTTGTTGCTGATTCTGATTCTGATTAA 882 0.4206 MEVTRATHERRRDGRHQLRKQFLCSDLGCSSGPTTFFVVSEVIKTVEKLCRELNHESPEYQVFEMDPNTVKSTLSNLAFGNVMAAAARDYQKELLAQNKAQTSSSVNQEVDLDELMDDPELEKLHADRIAALKKEAEKREAWKKKGHGEYREITEGDFLGEVTGSEKVICHFYHKEFYRCKIMDKHLKSLAPEHVDTKFIKLDAENAPFFVAKLTVKTLPCVILFRQGIAVDRLVGFQDLGGKDDFTTKTLEVLLIKKGIINEKRDEDDENDGYHEDSSRKIRSSVVADSDSD 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0035 293 Gene3D Glutaredoxin 140 273 - -
Lele53g0035 293 Pfam Thioredoxin 152 238 IPR013766 -
Lele53g0035 293 SUPERFAMILY Thioredoxin-like 106 263 IPR036249 -
Lele53g0035 293 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 19 66 IPR029063 -
Lele53g0035 293 MobiDBLite consensus disorder prediction 266 293 - -
Lele53g0035 293 Gene3D Vaccinia Virus protein VP39 3 110 IPR029063 -
Lele53g0035 293 PANTHER THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 65 293 - -
Lele53g0035 293 CDD Phd_like_TxnDC9 145 255 - -
Lele53g0035 293 Pfam SAM dependent carboxyl methyltransferase 18 66 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0035 Lele-ChrLele53 290780 295616 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0035 53 290780 295616 Lele53g0035 53 290780 295616 ECH
Lele53g0035 53 290780 295616 Lele55g1462 55 20788105 20791864 hybridization
Lele53g0035 53 290780 295616 Lele56g1398 56 17055915 17059487 hybridization