Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1379 ATGGCTTCCAACAAAGTTTCATGTTGTCGAGAGTCCAATCAGAGATGGACAGGCAAGAAGAACAAACTGTTTGAAGATGCTTTGGCTATATATGATCATGACACCCCTGACCGTTGGCGCAACATAGCTATACATGTCGGTGTCGTCACTGAAGTTGAAGTCAAGAAGCAGTATGAGATCCTTTTGGAGGACATCCAACAAATTGAGTCTGGCAAAGTTCCTCTCCCTCATTACAGCAGATATGCCGCATGTAGCAGACCAAACATCACCGGCTCAGAGCAGATAATTCTGGGTTCTTCATCCAAGGCTCGCAAAGAAATTCTAGCGGAGATGGGATATGAGTTCACCATTGTGACTGCAGACATTGATGAGAAAGGTATTAGGAGGGAAAAACCAGAAGACTTGGTAATGGCCTTAGCTGAGGCGAAGGCAGACGCTGTTATACAAAAGCTTCTAGCTGGGGAAAATATATTAAAGGAAGATGCTCTGGCGACACTGTTAATTACTGAAGATACGGTAGTGGTATACCAGGGAACTATCAGAGAAAAACCAATCAGCAAAGAACAAGCAAGGGAATATATCAAAGGATATTCTGGTGGTAATGCGGCAGTGGTAGGATCTGTTCTGATAACCAACCTTAAGACTGGAAAAAGATGTGAGGGATAG 666 0.4369 MASNKVSCCRESNQRWTGKKNKLFEDALAIYDHDTPDRWRNIAIHVGVVTEVEVKKQYEILLEDIQQIESGKVPLPHYSRYAACSRPNITGSEQIILGSSSKARKEILAEMGYEFTIVTADIDEKGIRREKPEDLVMALAEAKADAVIQKLLAGENILKEDALATLLITEDTVVVYQGTIREKPISKEQAREYIKGYSGGNAAVVGSVLITNLKTGKRCEG 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1379 221 Pfam Maf-like protein 94 216 IPR003697 GO:0047429
Lele56g1379 221 SUPERFAMILY Homeodomain-like 14 70 IPR009057 -
Lele56g1379 221 CDD SANT 15 62 IPR001005 -
Lele56g1379 221 Gene3D - 7 75 - -
Lele56g1379 221 Gene3D - 88 221 IPR029001 -
Lele56g1379 221 PANTHER BIFUNCTIONAL DTTP/UTP PYROPHOSPHATASE/METHYLTRANSFERASE PROTEIN-RELATED 93 220 IPR003697 GO:0047429
Lele56g1379 221 FunFam Transcription factor SRM1 9 75 - -
Lele56g1379 221 SUPERFAMILY ITPase-like 94 218 IPR029001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1379 Lele-ChrLele56 16906270 16914425 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele56g1379 56 16906270 16914425 Lele56g1379 56 16906270 16914425 ECH
Lele55g1444 55 20651686 20658054 Lele56g1379 56 16906270 16914425 ECH
Lele53g0053 53 414035 417564 Lele56g1379 56 16906270 16914425 hybridization
Lele54g0054 54 455188 460430 Lele56g1379 56 16906270 16914425 hybridization