Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0054 ATGGCTTCCAACAAAGTTTCATGTTGTGGAGAGTCCAATCAGAGATGGACAGGCAAGAAGAACAAACTGTTTGAAGATGCTTTGGCTATATATGATAAGGACACCCCTGACCGTTGGCTCAACATAGCTATACATGTCGGTGTCGTCACTGAAGTTGAAGTCAAGAAGCAGTATGAGATCCTTTTGGAGGACATCCAACAAATTGAGTCTGGCAAAGTTCCTCTCCCTCTTTACAGCAGATATGCCGCATGTAGCAGACCAAACATCACCGGCTCAGAGCAGGAGGTAGAAATATTGAAGAAAAAGCAAACTCAACCTGTATTACCTGGGAATCTGAAGAGCAAGAGCCTGAAACATACACATGCGCGGACAATAGAGATGGCTACGAGAAATCCGCCGTTCAAGATAATTCTGGGTTCTTCATCTAAGGCTCGCAAAGAAATTCTAGCGGAGATGGGATATGAGTTCACCATTGTGACTGCAGACATTGATGAGAAAGGTATTAGAAGGGAAAAACCAGAAGAGTTGGTAATGGCCTTAGCTGAGGCGAAGGCAGATGCTATTATACAAAAGCTTCTAGCTGGGGAAAATTCATTAAAGGAAGATGCTCTGGCGACACTGTTAATTACTGCAGATACGGTAGTGGTATACCAAGGAACTATCAGGGAAAAACCAATCAGCAAAGAACAAGCAAGGGAATATATCAAAGGATATTCTGGTGGTAATGCGGCAGTGGTAGGATCTGTTCTGATAACCAACCTTAAGACTGGAAAAAGATGCGAGGGATGGGAAAGCGCTGAGGTTTATTTCCTTGAAATACCGGACGAGGTCATTGATGCAGTGATTGACGAGGGAGTTACATTCAATGTTGCCGGGGGTTTGATGCTGGAACATCCTCTGACGTTGCCCTTTGTTGATTCAGTGGTGGGATCAACTGATACTGTGATGGGACTTTCGAAAGCTCTGACGGAGAAACTCTTATTGGAAGCTCTCTAG 996 0.4428 MASNKVSCCGESNQRWTGKKNKLFEDALAIYDKDTPDRWLNIAIHVGVVTEVEVKKQYEILLEDIQQIESGKVPLPLYSRYAACSRPNITGSEQEVEILKKKQTQPVLPGNLKSKSLKHTHARTIEMATRNPPFKIILGSSSKARKEILAEMGYEFTIVTADIDEKGIRREKPEELVMALAEAKADAIIQKLLAGENSLKEDALATLLITADTVVVYQGTIREKPISKEQAREYIKGYSGGNAAVVGSVLITNLKTGKRCEGWESAEVYFLEIPDEVIDAVIDEGVTFNVAGGLMLEHPLTLPFVDSVVGSTDTVMGLSKALTEKLLLEAL 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0054 331 PANTHER BIFUNCTIONAL DTTP/UTP PYROPHOSPHATASE/METHYLTRANSFERASE PROTEIN-RELATED 135 330 IPR003697 GO:0047429
Lele54g0054 331 SUPERFAMILY ITPase-like 134 328 IPR029001 -
Lele54g0054 331 CDD Maf 136 327 IPR003697 GO:0047429
Lele54g0054 331 Hamap dTTP/UTP pyrophosphatase. 135 331 IPR003697 GO:0047429
Lele54g0054 331 Gene3D - 9 75 - -
Lele54g0054 331 FunFam Maf-like protein, expressed 129 330 - -
Lele54g0054 331 Gene3D - 127 329 IPR029001 -
Lele54g0054 331 FunFam Transcription factor SRM1 10 75 - -
Lele54g0054 331 Pfam Maf-like protein 135 328 IPR003697 GO:0047429
Lele54g0054 331 SUPERFAMILY Homeodomain-like 14 70 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0054 Lele-ChrLele54 455188 460430 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0054 54 455188 460430 Lele54g0054 54 455188 460430 ECH
Lele53g0053 53 414035 417564 Lele54g0054 54 455188 460430 ECH
Lele54g0054 54 455188 460430 Lele55g1444 55 20651686 20658054 hybridization
Lele54g0054 54 455188 460430 Lele56g1379 56 16906270 16914425 hybridization