Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1444 ATGGCTTCCAACAAAGTTTCAGCCTCTGGAGAGTCCATTCAGAGATGGACAGGCAAGAAGAACAAGCTGTTTGAAGATGCTTTGGCTATATACGATAAGGAAACTCCTGATCGTTGGCGCAACATAGCCATTCATGTTGGTGTCACCTCTGAAGTTGAAGTCAAGAAGCAGTATGAGATCCTTTTGGAGGACATCCAACAAATTGAATCAGGCAAAGTTCCTCTCCCTCTTTACCGCAGATATGCAGCATGTAGCACACCAAACATCACCACCTCAGAGCAGAGTTCTATTTTGAATATCATGCATGGTCCAAGCATTTACAGTTTTGCTTCTGATAAACGTTTCATGGAAACCACTCCTCTTTTGGAATCTGCTCAAGAGCAAGAGCCTGAAACATACGCATGCGTGGACACTAGAGATGTCTACGAGAAATCTGCCGTTCGAGTTGGCTATCTTTATGAGGTACTAATACTGATACGTATTGCTTCGGCACAGATAATTCTGGGTTCTTCATCTAAGGCTCGCAAAGAAATTCTTGCGGAGATGGGATATGAGTTCTCCGTTGTGACTGCAGACATTGATGAAAAAGGTATTAGAAGGGAAAAACCAGAAGACTTGGTAGTAGCCTTAGCTGAGGCAAAGGCTGATGCTATTATACAAAAGCTTCTAGCTGGGGAGAATTCATTAAAGGAAGATGCTCTGCCAACGCTGTTAATTACTGCAGATACGGTAGTGGTATACCAAGGAACTATCAGGGAAAAACCAATCAGCAGAGAACAAGCAAGGGAATATATCAAAGGATATTCTGGTGGTAATGCGGCAGTGGTAGGATCTGTTCTGATAACCAACCTTGAGACTGGAAAAAGATGTGGGGGGTGGGAGAGCGCTGAGGTCTATTTCCTTGAAATACCGGATGAGGTCATTGATGCGGTGATTGACGAGGGAGTTACATTCAATGTTGCCGGGGGTTTGATGCTGGAACATCCTCTGACATTGCCCTTTGTTGATGCTGTGGTTGGATCAACCGATACTGTGATGGGACTTTCTAAAGCGCTGACGGAGAAACTCTTATTGGAAGCTCTATAG 1086 0.442 MASNKVSASGESIQRWTGKKNKLFEDALAIYDKETPDRWRNIAIHVGVTSEVEVKKQYEILLEDIQQIESGKVPLPLYRRYAACSTPNITTSEQSSILNIMHGPSIYSFASDKRFMETTPLLESAQEQEPETYACVDTRDVYEKSAVRVGYLYEVLILIRIASAQIILGSSSKARKEILAEMGYEFSVVTADIDEKGIRREKPEDLVVALAEAKADAIIQKLLAGENSLKEDALPTLLITADTVVVYQGTIREKPISREQAREYIKGYSGGNAAVVGSVLITNLETGKRCGGWESAEVYFLEIPDEVIDAVIDEGVTFNVAGGLMLEHPLTLPFVDAVVGSTDTVMGLSKALTEKLLLEAL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1444 361 FunFam Transcription factor SRM1 8 75 - -
Lele55g1444 361 Gene3D - 7 75 - -
Lele55g1444 361 Pfam Maf-like protein 165 358 IPR003697 GO:0047429
Lele55g1444 361 CDD SANT 15 62 IPR001005 -
Lele55g1444 361 SUPERFAMILY Homeodomain-like 15 70 IPR009057 -
Lele55g1444 361 Gene3D - 158 359 IPR029001 -
Lele55g1444 361 PANTHER BIFUNCTIONAL DTTP/UTP PYROPHOSPHATASE/METHYLTRANSFERASE PROTEIN-RELATED 163 360 IPR003697 GO:0047429
Lele55g1444 361 Hamap dTTP/UTP pyrophosphatase. 165 361 IPR003697 GO:0047429
Lele55g1444 361 CDD Maf 166 357 IPR003697 GO:0047429
Lele55g1444 361 SUPERFAMILY ITPase-like 164 358 IPR029001 -
Lele55g1444 361 FunFam Maf-like protein, expressed 159 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1444 Lele-ChrLele55 20651686 20658054 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele55g1444 55 20651686 20658054 Lele55g1444 55 20651686 20658054 ECH
Lele55g1444 55 20651686 20658054 Lele56g1379 56 16906270 16914425 ECH
Lele53g0053 53 414035 417564 Lele55g1444 55 20651686 20658054 hybridization
Lele54g0054 54 455188 460430 Lele55g1444 55 20651686 20658054 hybridization