Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1368 ATGAAGGATGACGACACTCTTCCTACAACTACTGCTAATGCGAAGAAGGAAAACACGGATTCCGGTCTGTTCGGTAGAGGGAAGTATAAATTCTGGGCGTTAGCTGCCATTTTGCTTCTTGCATTCTGGTCCATGTTCACCGGCACAGTCTCTCTGCGTTGGTCGGGGAGTCTCAATAGCTTATCTAATGACCTAGATACTCCAATCTATGATGACCTTGACGTGCTCGAAATGGAGGAGAGGGAGAAGGTGGTGAAGCACATGTGGGATGTATACACCAATAGCCGTCGGATCAGGTTGCCACGGTTCTGGCAGGAGGCATTTGAGGCTGCGTACGAAGAACTGACAAGTGATGTGCCCGAAGTAATAGACGCTGCCATAGCGGAGATTGCCAAGATGTCTGTGCGCTCAATTGGTTTCGACCATCCTCCCGTACAGTCCTCTGCGGGTCATTCTCAATCTTCAAGAGCAAGGCAATTTAGCAAGAGCCTCATTCAAGTTGGAAAAGAAGCATGA 516 0.4884 MKDDDTLPTTTANAKKENTDSGLFGRGKYKFWALAAILLLAFWSMFTGTVSLRWSGSLNSLSNDLDTPIYDDLDVLEMEEREKVVKHMWDVYTNSRRIRLPRFWQEAFEAAYEELTSDVPEVIDAAIAEIAKMSVRSIGFDHPPVQSSAGHSQSSRARQFSKSLIQVGKEA 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1368 171 MobiDBLite consensus disorder prediction 146 162 - -
Lele56g1368 171 MobiDBLite consensus disorder prediction 144 171 - -
Lele56g1368 171 Pfam Protein of unknown function (DUF1195) 6 144 IPR010608 -
Lele56g1368 171 PANTHER OS03G0411600 PROTEIN 1 159 IPR010608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1368 Lele-ChrLele56 16831359 16841167 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0174 49 1060155 1062739 Lele56g1368 56 16831359 16841167 CCT
Lele56g1368 56 16831359 16841167 Lele56g1368 56 16831359 16841167 ECH
Lele55g1437 55 20585727 20588593 Lele56g1368 56 16831359 16841167 ECH
Lele53g0060 53 480634 483568 Lele56g1368 56 16831359 16841167 hybridization
Lele54g0063 54 525088 528301 Lele56g1368 56 16831359 16841167 hybridization