Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0174 ATGAAACATGATGACGCACTTCCAACAACCACAGCCTTTGCGAAGAAGGAAAGTGCCGATTCGGGTTTGTCTGGTAAGGGGAAGTATAAATTCTGGGCACTAGCTGCCATTTTGCTTCTCGCATTTTGGTCCATGTTCACCGGCACTGTATCTCTTCGGTGGTCCGGAAGTCTCAACAGTTTGTCAAGTGATCTCGATACTCCCATCCATGATGACCTTGATGTCCTTGAAATGGAAGAGAGGGAGAAGGTGGTGAAACACATGTGGGATGTATACGCAAACAGCCGTCGGATCAGATTACCGCGATTTTGGCAGGAGGCATTCGAGGCCGCCTATGAAGTGCTGACTAGCGATGCGCCTGGGGTCAGAGAGGCCGCCATCACGGAGATAGCCAAGATGTCTGTGCGCTTCATTGATTTCGATCCCCCTCCAATCCAATCAACGAGGGCACAAGAATTTAGCAAGAGTCTCAAGCAAGATAAAAAAAGCAAAGCAGCAACAACTATTGGCGCTTAA 516 0.4884 MKHDDALPTTTAFAKKESADSGLSGKGKYKFWALAAILLLAFWSMFTGTVSLRWSGSLNSLSSDLDTPIHDDLDVLEMEEREKVVKHMWDVYANSRRIRLPRFWQEAFEAAYEVLTSDAPGVREAAITEIAKMSVRFIDFDPPPIQSTRAQEFSKSLKQDKKSKAATTIGA 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0174 171 PANTHER OS03G0411600 PROTEIN 1 166 IPR010608 -
Lele49g0174 171 MobiDBLite consensus disorder prediction 150 171 - -
Lele49g0174 171 Pfam Protein of unknown function (DUF1195) 6 144 IPR010608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0174 Lele-ChrLele49 1060155 1062739 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0174 49 1060155 1062739 Lele53g0060 53 480634 483568 CCT
Lele49g0174 49 1060155 1062739 Lele54g0063 54 525088 528301 CCT
Lele49g0174 49 1060155 1062739 Lele55g1437 55 20585727 20588593 CCT
Lele49g0174 49 1060155 1062739 Lele56g1368 56 16831359 16841167 CCT
Lele49g0174 49 1060155 1062739 Lele51g0191 51 1085717 1088297 hybridization
Lele49g0174 49 1060155 1062739 Lele52g0193 52 1143318 1146076 hybridization