Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0063 ATGAAATCAATTTCCTCAAGATGTGGTGTTCCACAAGATGTAAAGCTAGTGACCCTTGGCTCCTCTACCTTCTCCGGTGCGGATGACGACACTCTTCCTACAACTACTGCTAATACGAAGAAGGAAAACGCGGATTCCCGTCTGTTCGGTAGAGGGAAGTATAAATTCTGGGCGTTAGTTGCCATTTTGCTTCTTGCATTCTGGTCCATGTTCACCGGCACAGTCTCTCTACGTTGGTCGGGGAGTCTCAATAGCTTATCTAATGACCTAGATACTCCAATCTATGATGACCTCGACGTGCTCGAAATGGAGGAGAGGGAGAAGGTGGTGAAGCACATGTGGGATGTATACACCAATAGCCGTCGGATCAGGTTGCCACGGTTCTGGCAGGAGGCATTTGAGGCTGCGTACGAAGAACTGACAAGTGATGTGCCCGAAGTAATAGACGCTGCCATAACGGAGATTGCCAAGATGTCTGTGCGCTCAATTGTTTTCGACCATCCTCCCGTACAGTCCTCGAGAGCAAGGGAATTTAGCAAGAGCCTCATTCAAGTTGAAAATGGAAAAGAAGCAGCGACCTCTAGGCGTGCTTAA 594 0.4848 MKSISSRCGVPQDVKLVTLGSSTFSGADDDTLPTTTANTKKENADSRLFGRGKYKFWALVAILLLAFWSMFTGTVSLRWSGSLNSLSNDLDTPIYDDLDVLEMEEREKVVKHMWDVYTNSRRIRLPRFWQEAFEAAYEELTSDVPEVIDAAITEIAKMSVRSIVFDHPPVQSSRAREFSKSLIQVENGKEAATSRRA 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0063 197 Pfam Protein of unknown function (DUF1195) 31 169 IPR010608 -
Lele54g0063 197 Coils Coil 192 197 - -
Lele54g0063 197 PANTHER OS03G0411600 PROTEIN 32 190 IPR010608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0063 Lele-ChrLele54 525088 528301 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0174 49 1060155 1062739 Lele54g0063 54 525088 528301 CCT
Lele54g0063 54 525088 528301 Lele54g0063 54 525088 528301 ECH
Lele53g0060 53 480634 483568 Lele54g0063 54 525088 528301 ECH
Lele54g0063 54 525088 528301 Lele55g1437 55 20585727 20588593 hybridization
Lele54g0063 54 525088 528301 Lele56g1368 56 16831359 16841167 hybridization