Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0891 ATGGCGAGGTACGATAGAGCCATTACAGTTTTCTCACCGGATGGCCATCTTTTTCAAGTCGAATACGCCCTTGAAGCTGTTCGTAAAGGCAACGCCGCCGTCGGCGTCCGCGGCACCGATATCGTCGTTCTAGGTGTCGAGAAAAAATCAACCGCCAAACTCCAGGACTCCAGAACAGTGAGAAAGATTGTCAATCTGGATAATCACATTGCACTTGCTTGTGCAGGACTAAAAGCTGATGCCCGTGTTCTTATAAACAGAGCACGAGTTGAATGTCAAAGCCATAGGCTCACACTTGAGGATCCAGTGACTGTTGAGTACATAACTCGTTACATTGCAGGTCTTCAACAAAAGTACACTCAAAGTGGTGGTGTCCGACCATTTGGTCTTTCAACCTTGATTGTAGGCTTTGATCCATACACCGGTTCACCTTCCTTGTACCAAACAGACCCTTCAGGGACTTTTTCAGCTTGGAAAGCTAATGCTACTGGTAGAAACTCAAATTCAATTCGGGAATTCCTGGAGAAGAACTATAAGGAAACCTCTGGGCAAGAAACTGTAAAACAGGCCATTCGGGCATTGCTTGAAGTTGTCGAGAGTGGGGGGAAGAACATAGAAGTTGCTGTAATGACAAAGGAACATGGCCTTAGACAACTTGAGGAATCGGAGATCGATGCCATTGTTGCTGAGATTGAAGCAGAGAAAGAAGCTGCTGAGGCTGCTAAAAAAGCCCCTCCTAAGAAGACCTGA 750 0.4627 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDIVVLGVEKKSTAKLQDSRTVRKIVNLDNHIALACAGLKADARVLINRARVECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGSPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKETSGQETVKQAIRALLEVVESGGKNIEVAVMTKEHGLRQLEESEIDAIVAEIEAEKEAAEAAKKAPPKKT 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0891 249 CDD proteasome_alpha_type_7 4 210 - -
Lele56g0891 249 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 3 234 IPR029055 -
Lele56g0891 249 ProSiteProfiles Proteasome alpha-type subunit profile. 19 228 IPR023332 -
Lele56g0891 249 SMART Proteasome_A_N_2 4 26 IPR000426 GO:0006511|GO:0019773
Lele56g0891 249 Pfam Proteasome subunit 27 210 IPR001353 GO:0005839|GO:0051603
Lele56g0891 249 Pfam Proteasome subunit A N-terminal signature 4 26 IPR000426 GO:0006511|GO:0019773
Lele56g0891 249 FunFam Proteasome subunit alpha type-4 1 241 - -
Lele56g0891 249 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 8 234 - -
Lele56g0891 249 ProSitePatterns Proteasome alpha-type subunits signature. 4 26 IPR000426 GO:0006511|GO:0019773
Lele56g0891 249 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 3 246 IPR029055 -
Lele56g0891 249 Coils Coil 224 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0891 Lele-ChrLele56 7487751 7495069 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele55g0968 55 7292644 7295113 Lele56g0891 56 7487751 7495069 ECH
Lele56g0891 56 7487751 7495069 Lele56g0891 56 7487751 7495069 ECH
Lele54g0543 54 11858353 11862292 Lele56g0891 56 7487751 7495069 hybridization