Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0543 ATGGCGAGGTACGATAGAGCCATTACAGTTTTCTCACCCGATGGCCATCTTTTTCAAGTCGAATACGCCCTTGAAGCTGTTCGTAAAGGCAACGCCGCCGTCGGCGTCCGCGGCACCGATATCGTCGTTCTAGGCGTCGAGAAAAAATCAACCGCTAAACTCCAGGACTCCAGAACAGTGAGAAAGATTGTCAATCTGGATAATCACATTGCACTTGCTTGTGCAGGACTAAAAGCTGATGCCCGTGTTCTTATAAACAGAGCACGAGTTGAATGTCAAAGCCACAGGCTCACACTTGAGGATCCAGTGACTGTTGAGTACATAACTCGTTACATTGCAGGTCTTCAACAAAAGTACACTCAAAGTGGTGGTGTCCGACCATTTGGTCTTTCAACCTTGATTGTAGGCTTTGATCCATACACCGGTTCACCTTCCTTGTACCAAACAGACCCTTCAGGGACTTTTTCAGCTTGGAAAGCTAATGCTACTGGTAGAAACTCAAATTCAATTCGGGAATTCCTAGAGAAGAACTATAAGGAAACCTCTGGGCAAGAAACTGTAAAACTGGCCATCCGGGCATTGCTTGAAGTGACAAAGAACTTGAAAGAGGTTGATGAGATTCAAGATGTTAATAAAATGGATGAGAGCTCTAGAGATGCAACCTTACTTTTGGATGAGTACTTTATATCTTGGATAGATAAATTTGTGTGCTTAACAGAGACTGCTGTGGCTTTTTGCGAAGTGTTAAGACTGGTGCTGAATACCTTTCATGAGAGATCTTATCACTTGCTGGTCTTAAATTTAAAAATGCTTTCACTATGGACAGTGGATGTACGGTTGTTATAG 846 0.4326 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDIVVLGVEKKSTAKLQDSRTVRKIVNLDNHIALACAGLKADARVLINRARVECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGSPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKETSGQETVKLAIRALLEVTKNLKEVDEIQDVNKMDESSRDATLLLDEYFISWIDKFVCLTETAVAFCEVLRLVLNTFHERSYHLLVLNLKMLSLWTVDVRLL 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0543 281 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 3 207 IPR029055 -
Lele54g0543 281 FunFam Proteasome subunit alpha type-4 1 233 - -
Lele54g0543 281 Pfam Proteasome subunit 27 200 IPR001353 GO:0005839|GO:0051603
Lele54g0543 281 SMART Proteasome_A_N_2 4 26 IPR000426 GO:0006511|GO:0019773
Lele54g0543 281 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 1 226 IPR029055 -
Lele54g0543 281 ProSiteProfiles Proteasome alpha-type subunit profile. 19 253 IPR023332 -
Lele54g0543 281 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 8 203 - -
Lele54g0543 281 CDD proteasome_alpha_type_7 4 207 - -
Lele54g0543 281 ProSitePatterns Proteasome alpha-type subunits signature. 4 26 IPR000426 GO:0006511|GO:0019773
Lele54g0543 281 Pfam Proteasome subunit A N-terminal signature 4 26 IPR000426 GO:0006511|GO:0019773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0543 Lele-ChrLele54 11858353 11862292 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0543 54 11858353 11862292 Lele54g0543 54 11858353 11862292 ECH
Lele54g0543 54 11858353 11862292 Lele55g0968 55 7292644 7295113 hybridization
Lele54g0543 54 11858353 11862292 Lele56g0891 56 7487751 7495069 hybridization