Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0784 ATGGCTGCATGTACTTTCCCGATCTTTGAGCTTGAGAAATTTTTAAAAAATCTTGGAAACAAAATGTCTAATGTTGATGAACCACTATATCCAATAGCGGTGCTCATTGACGAGCTGAAAAATGATGACATTCAGCTACGCCTGAATTCAATTCGCAAACTATCAACAATTGCACGTGCTCTTGGGGAGGAGCGAACTCGTAAGGAATTAATTCCATTTCTAAGTGAGAACAATGATGATGATGATGAGGTGCTTCTTGCGATGGCGGAAGAGTTGGGAGTGTTTATTCCTTATGTTGGGGGAGTGGAACATGCCAATGTGTTACTCCCACCTCTGGAGACACTTTGCACTGTTGAGGAAACTTGTGTGAGAGACAAAGCAGTGGAGTCTCTTTGTAGAATTGGATCTCAAATGAGGGAGAGTGATTTGGTTGATTCATTTATCCCGTTGGTGAAGAGGTTGGCAGCAGGTGAATGGTTTACTGCCCGAGTCTCTGCATGTGGACTATTTCATATTGCATACTCGAGTGCACCAGATACATCAAAGACTGAGTTGAGGTCAATATACAGTCAATTGTGTCAAGATGACATGCCCATGGTTAGAAGGTCTGCTGCTTCAAACCTCGGCAAATTTGCAGCAACTGTTGAATATCCTCATTTGAAGGCAGACATCATGCAAATTTTTGAGGATCTTACTCAGGATGATCAAGATTCTGTTAGACTGTTGGCTGTGGAGAGCTGCGCTGCTCTTGGCAAGCTGTTGGAACCTCACGATTGTGTTGCACATATACTCCCTGTTATTGTCAACTTCTCTCAGGATAAGTCTTGGCGTGTGCGTTACATGGTTGCTAATCAATTGTATGAGCTATGTGAGGCCGTAGGCCCTGAACCGACCAGAACGGAGTTGGTCCCCGCATATGTTCGGTTGCTACGTGACAATGAGGCTGAAGTGCGTATTGCAGCTGCTGGAAAGGTCACCAAGTTCTGCAAAATTTTAAATCCAGAACTTGCTATTCAGCATATTCTCCCTTGTGTAAAGGAATTGTCATCAGATTCTTCGCAGCATGTCCGTTCTGCTTTGGCTTCAGTAATTATGGGAATGGCTCCAGTGTTAGGAAAGGATGCTACAATTGAGCAGCTTCTTCCGATTTTTCTCTCCCTTCTAAAGGATGAATTTCCTGATGTGCGTTTGAACATCATCAGCAAGCTTGATCAAGTGAATCAGGTTATTGGAATCGATTTGTTATCTCAATCTTTGTTACCAGCCATTGTTGAGCTAGCCGAAGATAGGCATTGGAGAGTTCGCCTTGCAATTATAGAGTATATACCCTTATTGGCGAGTCAATTGGGTGTAGGATTTTTTGATGATAAGCTAGGTGGTCTTTGCATGCAATGGTTACAGGATAAGGTTCACTCAATTCGTGATGCAGCTGCTAACAACTTGAAGCGGCTTGCTGAAGAATTTGGTCCTGAGTGGGCTATGCAGCATATAATTCCACAGGTTTTGGAGATGATCAACAATCCACACTACTTGTATCGGATGACCATTCTCCGAGCTGTTTCTCTTCTTTCTCCTGTAATGGGTGCTGAACTCACTTGTTCGAAATTGTTGCCCGTCGTTATTGCAGCATCAAAAGACAAAGTGCCCAACATCAAGTTCAATGTCGCGAAGGTGCTAGAGTCAATCTTCCCCATTGTTGATCAGTCTGTCGTGGAAAATACGATTCGTCCATGTCTGGTTGAGCTTAGTGAGGATCCTGATGTCGATGTTCGATATTTCTCCAACCAAGCACTTCAGGCAATTGATCATGTCATGATGTCTAGTTAG 1827 0.434 MAACTFPIFELEKFLKNLGNKMSNVDEPLYPIAVLIDELKNDDIQLRLNSIRKLSTIARALGEERTRKELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGVEHANVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRESDLVDSFIPLVKRLAAGEWFTARVSACGLFHIAYSSAPDTSKTELRSIYSQLCQDDMPMVRRSAASNLGKFAATVEYPHLKADIMQIFEDLTQDDQDSVRLLAVESCAALGKLLEPHDCVAHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTELVPAYVRLLRDNEAEVRIAAAGKVTKFCKILNPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGGLCMQWLQDKVHSIRDAAANNLKRLAEEFGPEWAMQHIIPQVLEMINNPHYLYRMTILRAVSLLSPVMGAELTCSKLLPVVIAASKDKVPNIKFNVAKVLESIFPIVDQSVVENTIRPCLVELSEDPDVDVRYFSNQALQAIDHVMMSS 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0784 608 ProSiteProfiles HEAT repeat profile. 419 457 IPR021133 -
Lele56g0784 608 ProSiteProfiles HEAT repeat profile. 224 262 IPR021133 -
Lele56g0784 608 ProSiteProfiles HEAT repeat profile. 575 608 IPR021133 -
Lele56g0784 608 ProSiteProfiles HEAT repeat profile. 536 574 IPR021133 -
Lele56g0784 608 ProSiteProfiles HEAT repeat profile. 302 340 IPR021133 -
Lele56g0784 608 ProSiteProfiles HEAT repeat profile. 380 418 IPR021133 -
Lele56g0784 608 ProSiteProfiles HEAT repeat profile. 31 69 IPR021133 -
Lele56g0784 608 FunFam Serine/threonine-protein phosphatase 2A regulatory subunit A alpha isoform 23 602 - -
Lele56g0784 608 ProSiteProfiles HEAT repeat profile. 263 301 IPR021133 -
Lele56g0784 608 ProSiteProfiles HEAT repeat profile. 185 223 IPR021133 -
Lele56g0784 608 SUPERFAMILY ARM repeat 29 601 IPR016024 -
Lele56g0784 608 ProSiteProfiles HEAT repeat profile. 497 535 IPR021133 -
Lele56g0784 608 ProSiteProfiles HEAT repeat profile. 341 379 IPR021133 -
Lele56g0784 608 Pfam HEAT repeats 382 482 - -
Lele56g0784 608 Pfam HEAT repeat 263 291 IPR000357 GO:0005515
Lele56g0784 608 Gene3D - 22 604 IPR011989 -
Lele56g0784 608 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 24 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0784 Lele-ChrLele56 5982802 5987211 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0645 53 16615904 16621139 Lele56g0784 56 5982802 5987211 hybridization
Lele54g0656 54 13493920 13498656 Lele56g0784 56 5982802 5987211 hybridization