Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0656 ATGGAGCAACATTGGGGATCACACCGTCTAAATCTTGGAAACAAAATGTCTAATGTTGATGAACCACTATATCCAATAGCGGTGCTCATTGACGAGCTGAAAAATGATGACATTCAGCTACGCCTGAATTCAATTCGCAAACTATCAACAATTGCACGTGCTCTTGGGGAGGAGCGAACTCGTAAGGAATTAATTCCATTTCTAAGTGAGAACAATGATGATGATGATGAGGTGCTTCTTGCGATGGCGGAAGAGTTGGGAGTGTTTATTCCTTATGTTGGGGGAGTAGAACATGCCAATGTGTTACTCCCACCTCTGGAGACGCTTTGCACTGTTGAGGAAACTTGTGTGAGAGACAAAGCAGTGGAGTCTCTTTGTAGAATTGGATCTCAAATGAGGGAGAGTGATTTGGTTGATTCATTTATCCCGTTGGTGAAGAGGTTGGCAGCAGGTGAATGGTTTACTGCCCGAGTCTCTGCATGTGGATTATTTCATATTGCATACTCGAGTGCACCAGATACATCAAAGACTGAGTTGAGGTCAATATACAGTCAATTGTGTCAAGATGACATGCCCATGGTTAGAAGGTCTGCTGCATCAAACCTCGGCAAATTTGCAGCAACTGTTGAATATCCTCATCTGAAGGCAGACATCATGCAAATTTTTGAGGATCTTACTCAGGATGATCAAGACTCTGTTAGACTATTGGCGGTGGAGAGCTGTGCTGCTCTTGGCAAGCTGTTAGAACCTCACGATTGTGTTACACATATACTCCCTGTTATTGTCAACTTCTCTCAGGATAAGTCTTGGCGCGTGCGTTACATGGTTGCTAATCAATTGTATGAGCTATGTGAGGCCGTAGGCCCTGAACCCACCAGAACAGAGTTGGTCCCCGCATATGTTCGGTTGCTACGTGACAACGAGGCTGAAGTGCGTATTGCAGCTGCTGGAAAAGTTACCAAGTTCTGCAAAATTTTAAATCCAGAACTTGCTATTCAGCATATTCTCCCTTGTGTAAAGGAATTGTCATCAGATTCTTCGCAGCATGTCCGTTCTGCTTTGGCTTCAGTAATTATGGGAATGGCTCCAGTTTTAGGGAAGGATGCTACAATTGAGCAGCTTCTTCCGATTTTTCTCTCCCTTCTAAAGGATGAATTTCCTGATGTGCGTTTGAACATCATCAGCAAGCTTGATCAAGTGAATCAGGTTATTGGAATCGATTTGTTATCTCAATCTTTGTTACCAGCCATTGTTGAGCTAGCCGAAGATAGGCATTGGAGAGTTCGCCTTGCAATTATAGAGTATATACCCTTACTGGCGAGTCAATTGGGTGTAGGATTTTTTGATGATAAGCTAGGTGGTCTTTGCATGCAATGGTTACAGGATAAGGTTCACTCAATTCGTGATGCGGCTGCTAACAACTTGAAGCGGCTTGCTGAAGAATTTGGTCCTGAGTGGGCTATGCAGCATATAATTCCACAGGTTTTGGAGATGATCAACAATCCACACTACTTGTATCGGATGACCATTCTTCAAGCTGTTTCTCTTCTTTCTCCTGTAATGGGTGCTGAAATCACTTGTTCGAAATTGTTGCCCGTCGTTATTGCAGCATCAAAAGACAAAGTGCCCAACATCAAGTTCAATGTCGCAAAGGTGCTAGAGTCAATCTTCCCCCTTGTTGATCAGTCTGTCGTGGAAAATACGATTCGTCCATGTCTGGTGGAGCTTAGTGAGGATCCTGATGTCGATGTTCGACATTTCTCCAACCAAGCACTTCAGGCAATTGATCATGTCATGATGTCTAGTTAG 1809 0.4362 MEQHWGSHRLNLGNKMSNVDEPLYPIAVLIDELKNDDIQLRLNSIRKLSTIARALGEERTRKELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGVEHANVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRESDLVDSFIPLVKRLAAGEWFTARVSACGLFHIAYSSAPDTSKTELRSIYSQLCQDDMPMVRRSAASNLGKFAATVEYPHLKADIMQIFEDLTQDDQDSVRLLAVESCAALGKLLEPHDCVTHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTELVPAYVRLLRDNEAEVRIAAAGKVTKFCKILNPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGGLCMQWLQDKVHSIRDAAANNLKRLAEEFGPEWAMQHIIPQVLEMINNPHYLYRMTILQAVSLLSPVMGAEITCSKLLPVVIAASKDKVPNIKFNVAKVLESIFPLVDQSVVENTIRPCLVELSEDPDVDVRHFSNQALQAIDHVMMSS 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0656 602 ProSiteProfiles HEAT repeat profile. 413 451 IPR021133 -
Lele54g0656 602 ProSiteProfiles HEAT repeat profile. 257 295 IPR021133 -
Lele54g0656 602 ProSiteProfiles HEAT repeat profile. 296 334 IPR021133 -
Lele54g0656 602 Pfam HEAT repeat 257 285 IPR000357 GO:0005515
Lele54g0656 602 ProSiteProfiles HEAT repeat profile. 25 63 IPR021133 -
Lele54g0656 602 FunFam Serine/threonine-protein phosphatase 2A regulatory subunit A alpha isoform 17 596 - -
Lele54g0656 602 ProSiteProfiles HEAT repeat profile. 218 256 IPR021133 -
Lele54g0656 602 ProSiteProfiles HEAT repeat profile. 374 412 IPR021133 -
Lele54g0656 602 ProSiteProfiles HEAT repeat profile. 335 373 IPR021133 -
Lele54g0656 602 Gene3D - 16 598 IPR011989 -
Lele54g0656 602 ProSiteProfiles HEAT repeat profile. 491 529 IPR021133 -
Lele54g0656 602 ProSiteProfiles HEAT repeat profile. 569 602 IPR021133 -
Lele54g0656 602 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 18 597 - -
Lele54g0656 602 ProSiteProfiles HEAT repeat profile. 179 217 IPR021133 -
Lele54g0656 602 Pfam HEAT repeats 376 476 - -
Lele54g0656 602 ProSiteProfiles HEAT repeat profile. 530 568 IPR021133 -
Lele54g0656 602 SUPERFAMILY ARM repeat 23 595 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0656 Lele-ChrLele54 13493920 13498656 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0656 54 13493920 13498656 Lele55g0843 55 5818333 5822535 hybridization
Lele54g0656 54 13493920 13498656 Lele56g0784 56 5982802 5987211 hybridization