Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0698 ATGGACACTTTATCTTTGCAAATTGACAAATATCCGAGGGATCTGCTCCGGACATTCATGTCCAGGGACAATACTCAACAATCCGAAAGGTCAGAGCCTGAGGGTGGTGGTGGTTCGGATGAGATTGAGCTGAATCTTGGACTTTCGCTGGGTGGACGATTTGGTGTTGATAAGCATGCTAAGAAGTTAGGGCGATCATCTTCTATCGTCGGAACAATGCCTCTAGTGAGAGAGAACGAGTCCACAACGCCCCCAACACCGTCGTATCCAGCCCTTTTGAGGACATCTTCGCTTCCGGCGGAGACGGAGGAGGAGTGGAGGAAGAGGAAGGAGTTGCAGATGTTGAGGCGAATGGAGGCGAAGAGAAGACGGTCTGAGAAGCAGAGGAACGCTAGGACGGAGAGAGACGGTGGCGAAGGGAGGACGGAAATGGACGACCCAAAGGGAAGTGATTGGGCCTCTGGGCCTCCCAGATGGGCTGCAGCAGCGCCTAGGCAAGTGGTTCTTAGTGATGTATTGGCCCAAGGAAAAGCCCATGGGCTATGGGGTGGAACAGCCTGTTTCCACGGGGGAAGCTCGTCATCGGGAATGACAGAAACGGAGGGCAAACCATTTCAAGGATCAAGTAATTGTGGTGAAGGAAGAAGCCATGCAAATAAACAGATGTTGCAGGAAACAAGTAATCAGGATGCTGTGGATTCCTCTGGGACAAAGTCAAATGAGAATATGATCAAAACACCGAGTGAGGTGGAGAATCCATCAAGAAAACCCCAACATGGCCGAAACAGAGGGAGGGAAATTGGGTCAAATTCAATGGAAGACATGCCTTGTGTTTTTACACAAGGAACTGGCCCTAATGGGAAAAGAATTGAGGGAATATTGTACAGATATGGTAGAGGGCAAGAAGTGAGGATTATGTGTGTATGCCATGGAAACTTTCTCTCTCCAGCAGAGTTTGTGAAGCATGCTGGTGGTGGTGATGTTGCTCACCCACTTAGACACATAGTGGTAAACCCGTCCTCTACTTCCTATTTGTAA 1038 0.4933 MDTLSLQIDKYPRDLLRTFMSRDNTQQSERSEPEGGGGSDEIELNLGLSLGGRFGVDKHAKKLGRSSSIVGTMPLVRENESTTPPTPSYPALLRTSSLPAETEEEWRKRKELQMLRRMEAKRRRSEKQRNARTERDGGEGRTEMDDPKGSDWASGPPRWAAAAPRQVVLSDVLAQGKAHGLWGGTACFHGGSSSSGMTETEGKPFQGSSNCGEGRSHANKQMLQETSNQDAVDSSGTKSNENMIKTPSEVENPSRKPQHGRNRGREIGSNSMEDMPCVFTQGTGPNGKRIEGILYRYGRGQEVRIMCVCHGNFLSPAEFVKHAGGGDVAHPLRHIVVNPSSTSYL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0698 345 MobiDBLite consensus disorder prediction 117 148 - -
Lele56g0698 345 MobiDBLite consensus disorder prediction 191 274 - -
Lele56g0698 345 MobiDBLite consensus disorder prediction 117 159 - -
Lele56g0698 345 MobiDBLite consensus disorder prediction 252 268 - -
Lele56g0698 345 Pfam Putative nuclear localisation signal 92 201 IPR032310 -
Lele56g0698 345 MobiDBLite consensus disorder prediction 191 251 - -
Lele56g0698 345 Pfam Ethylene-responsive binding factor-associated repression 39 71 IPR012463 -
Lele56g0698 345 Pfam Tify domain binding domain 302 337 IPR032308 -
Lele56g0698 345 PANTHER AFP HOMOLOG 2 11 341 IPR031307 GO:0007165
Lele56g0698 345 MobiDBLite consensus disorder prediction 19 33 - -
Lele56g0698 345 Coils Coil 108 135 - -
Lele56g0698 345 MobiDBLite consensus disorder prediction 19 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0698 Lele-ChrLele56 5215657 5218239 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0739 53 17422776 17426905 Lele56g0698 56 5215657 5218239 hybridization
Lele54g0735 54 14291006 14293841 Lele56g0698 56 5215657 5218239 hybridization