Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0735 ATGAGCCAAGATAATAACGAAGAGAGAAGAAGAAAAGCAATGGAGACTTTATCTTTGCAAATTGACAAATATCCGAGGGATCTGCTCCGGACATTCATGTCCAGGGACAATACTCAACAATCCGAAAGCTCAGAGCCTGAGGGTGGTGGTGGTTCGGAGGAGATTGAGCTGAATCTTGGACTTTCGCTGGGTGGTCGATTTGGTGTTGATAAGCATGCTAAGAAGTTAGGGCGATCATCGTCTATCGTCGGAATAATGCCTCTCGTGAGGGAGAACGAGTCCACAACGCCACCAACACCGTCGTATCCAGCCCTTTTGAGGACATCTTCGCTTCCGGTGGAGACGGAGGAGGAGTGGAGGAAGAGGAAGGAGTTGCAGATGTTGAGGCGAATGGAGGCGAAGAGAAGACGGTCTGAGAAGCAGAGGAACGCTAGGACGGAGAGAGACGGTGGCGAAGGAAGGACGGAAATCGACGGCCCAAAGGGAGGTGATTGGGCCTTTGGGCCGCCCAGATGGGCTGCAGCAGCTCCTAGGCAAGTGGTTCTTAGTGATGTATTGGCCCAAGGAGAAGCCCATGGGCTATTGAGGGGAACTGCCGGTTTCCACGGGGGAAGCTCGTCATCGGGAATGACAGAAACGGAGGGCAAACCATTTCAAGGATTAAGTAATCGTGGTGAAGGAAGAAGCCCTGCTAATAATCAGATGTTGCAGGAAAGAAGTAATCAGGATGCTGTGGATTCCTCTGGGACAAAGTCAAATGAGAATATGATCAAAACACCGAGTGAGGTGGAGAATCCATCAAGAAAACCCCAACATGGCCAAAACAGAGGGAGGGAAATTGGGTCAAGTTCAATGGAAGACATGCCTTGTGTTTTTACACAAGGGACTGGCCCTAATGGGAAAAGAATTGAGGGAATATTGTACAGATATGGTAGAGGGCAGGAAGTGAGGATTATGTGTGTATGCCATGGAAACTTTCTCTCTCCAGCAGAGTTTGTGAAGCATGCTGGTGGTGGTGATGTTACTCACCCACTTAGACACATAGTGGTAAACCCGTCCTCTACTCCCTATTTGTAA 1077 0.493 MSQDNNEERRRKAMETLSLQIDKYPRDLLRTFMSRDNTQQSESSEPEGGGGSEEIELNLGLSLGGRFGVDKHAKKLGRSSSIVGIMPLVRENESTTPPTPSYPALLRTSSLPVETEEEWRKRKELQMLRRMEAKRRRSEKQRNARTERDGGEGRTEIDGPKGGDWAFGPPRWAAAAPRQVVLSDVLAQGEAHGLLRGTAGFHGGSSSSGMTETEGKPFQGLSNRGEGRSPANNQMLQERSNQDAVDSSGTKSNENMIKTPSEVENPSRKPQHGQNRGREIGSSSMEDMPCVFTQGTGPNGKRIEGILYRYGRGQEVRIMCVCHGNFLSPAEFVKHAGGGDVTHPLRHIVVNPSSTPYL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0735 358 MobiDBLite consensus disorder prediction 92 108 - -
Lele54g0735 358 MobiDBLite consensus disorder prediction 113 159 - -
Lele54g0735 358 Coils Coil 121 148 - -
Lele54g0735 358 MobiDBLite consensus disorder prediction 91 171 - -
Lele54g0735 358 PANTHER AFP HOMOLOG 2 24 354 IPR031307 GO:0007165
Lele54g0735 358 MobiDBLite consensus disorder prediction 1 20 - -
Lele54g0735 358 Pfam Putative nuclear localisation signal 105 214 IPR032310 -
Lele54g0735 358 MobiDBLite consensus disorder prediction 201 218 - -
Lele54g0735 358 MobiDBLite consensus disorder prediction 32 47 - -
Lele54g0735 358 MobiDBLite consensus disorder prediction 1 17 - -
Lele54g0735 358 Pfam Tify domain binding domain 315 350 IPR032308 -
Lele54g0735 358 MobiDBLite consensus disorder prediction 197 286 - -
Lele54g0735 358 MobiDBLite consensus disorder prediction 28 57 - -
Lele54g0735 358 MobiDBLite consensus disorder prediction 225 268 - -
Lele54g0735 358 Pfam Ethylene-responsive binding factor-associated repression 52 84 IPR012463 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0735 Lele-ChrLele54 14291006 14293841 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0735 54 14291006 14293841 Lele55g0752 55 5021737 5025828 hybridization
Lele54g0735 54 14291006 14293841 Lele56g0698 56 5215657 5218239 hybridization