Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0739 ATGTCTGACCGACACGTGGCGACCACACCCGATTATCCATTTCGCGACACCCAAGATAAGGAAGAGAGAAGAAGAAAAGCAATGGAGACTTTATCTTTGCAAATTGACAAATATCCGAGGGATCTGCTCCGGACATTCATGTCCAGGGATAATCCTCAACAATCTGAAAGCTCGGAGCCTGAGGGTGGTGATTCGGAGGAGATTGAGCTGAATCTTGGACTTTCGCTGGGTGGACGATTTGGTGTTGATAAGCATGCTAAGAAGTTAGGGCGATCATCGTCTATCGTTGGAACAATGCCTCTCGTGAGAGAGAACGAGTCCACAACGCCGCCAACGCCGTCGTATCCAGCTCTTTTGAGGACATCTTCGCTTCCGACGGAGACGGAGGAGGAGTGGAGGAAGAGGAAGGAGTTGCAGATGTTGAGGCGAATGGAGGCGAAGAGAAGACGGTCTGAGAAGCAGAGGAACACTAGGACGGAGAGAGATGGCGTCGAAGGAAGGACTGAAATGGACGGCCCAAAGGGAAGTGATTGGGCATTTGGGCTACCCAACTGGGCTGGGGCCGCATCAAGGCAAGTAGTTCTTAGTGATGTGTTGGCCCAAGGAAAAGCCCATGGGATATTGGGTGGAACTTCTGGTTTTCACGGGGGAAGCTCGTCGTCGGGAATGACAGAAATGGAGGGCAAACCATTTCAAGGATCAAGTAATTGTGGTGAAGCAAGAAGCCCTGCTAGTAATCAGGTGTTGCAGGAAAGAAGCAATCAGGATGCTGTGGGTTCCTCTGGGACAAAGTCAAATGAGAGAATGATCAAAACATCCAGTGAGGTGGAGAATCCATCAAGAAAACCACATCATGGCCAAAACAGAGGGAGGGAAATTGGGTCAAATTCAGTGGAAGACATGCCTTGTGTTTTTACACAAGGGACTGGCCCTAATGGGAAAAGAATTGAGGGAATATTGTACAGATATGGTAGAGGACAGGAAGTGAGGATTATGTGCGTGTGCCATGGAAACTTTCTCTCGCCAGCAGAGTTTGTGAAGCATGCTGGTGGTGGTGATGTTGCTCACCCACTTAGACACATAGTGGTGAACCCTTCCTCTACTAACTATGTGTAA 1116 0.491 MSDRHVATTPDYPFRDTQDKEERRRKAMETLSLQIDKYPRDLLRTFMSRDNPQQSESSEPEGGDSEEIELNLGLSLGGRFGVDKHAKKLGRSSSIVGTMPLVRENESTTPPTPSYPALLRTSSLPTETEEEWRKRKELQMLRRMEAKRRRSEKQRNTRTERDGVEGRTEMDGPKGSDWAFGLPNWAGAASRQVVLSDVLAQGKAHGILGGTSGFHGGSSSSGMTEMEGKPFQGSSNCGEARSPASNQVLQERSNQDAVGSSGTKSNERMIKTSSEVENPSRKPHHGQNRGREIGSNSVEDMPCVFTQGTGPNGKRIEGILYRYGRGQEVRIMCVCHGNFLSPAEFVKHAGGGDVAHPLRHIVVNPSSTNYV 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0739 371 MobiDBLite consensus disorder prediction 206 299 - -
Lele53g0739 371 MobiDBLite consensus disorder prediction 99 119 - -
Lele53g0739 371 MobiDBLite consensus disorder prediction 213 269 - -
Lele53g0739 371 MobiDBLite consensus disorder prediction 144 172 - -
Lele53g0739 371 Coils Coil 134 154 - -
Lele53g0739 371 Pfam Ethylene-responsive binding factor-associated repression 64 97 IPR012463 -
Lele53g0739 371 MobiDBLite consensus disorder prediction 14 31 - -
Lele53g0739 371 MobiDBLite consensus disorder prediction 144 176 - -
Lele53g0739 371 PANTHER AFP HOMOLOG 2 38 367 IPR031307 GO:0007165
Lele53g0739 371 Pfam Putative nuclear localisation signal 118 227 IPR032310 -
Lele53g0739 371 Pfam Tify domain binding domain 328 363 IPR032308 -
Lele53g0739 371 MobiDBLite consensus disorder prediction 1 70 - -
Lele53g0739 371 MobiDBLite consensus disorder prediction 270 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0739 Lele-ChrLele53 17422776 17426905 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0739 53 17422776 17426905 Lele55g0752 55 5021737 5025828 hybridization
Lele53g0739 53 17422776 17426905 Lele56g0698 56 5215657 5218239 hybridization