Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0135 ATGGCCGACGCTCTCTCGGTAATTCCTGCTGCTGTGCTCCGCAACCTTGCTGACAAGCTCTATGAGAAGCGCAAGAATGCTGCTCTTGAGGTTGAGGGGGTTGTGAAGCAGCTCTCTGTTGCTGGGGATCATGAAAAAATCACGGCAGTGATCAACTTGTTGATCACGGAATATACTTTCTCGCCACAAGCAAATCAACGGAAGGGAGGATTGATAGGACTAGCTGCCGCGACAGTTGGGTTGACTAATGAAGCCGCTCAGCATCTTGAGCAAATCGTGCCTCCTGTGTTAAAGTCTTTCTGTGATCAAGATAGCAGAGTTCGTTATTATGCTTGTGAAGCGCTATACAACATTGCTAAGGTTGTGAGAGGGGAATTTATTGTATTCTTTAATCAGATCTTTGATGCCTTATGCAAGCTTTCCGCAGACTCAGATGCCAATGTACAAAGTGCTGCTCATCTCCTGGATCGGCTTGTGAAGGATATTGTGACTGAAAGCGATCAGTTTAGTATTGAAGAATTTATACCATTATTGAGGGAGCGCATGAATGTCCTGAATCCATATGTTCGTCAGTTTTTGGTTGGATGGATTACTGTGTTGGACAGTGTCCCAGATATTGATATGCTGGGCTTTCTTCCTGATTTTCTTGATGGTAAACTCTATCATTTGAAGGTTTACTTGCTACTCTTGAAGTCTGTAGATTATGGTCGCATGGCTGAAATACTGGTTCAGAGGGCAGGATCTCCAGATGAATTTACTAGATTAACAGCTATCACATGGATAAATGAGTTTGTCAAACTTGGTGGAGATCAGCTAGTTCGATATTATGCTGACATACTTGGAGCCATTCTGCCTTGCATATCTGATAAAGAAGAGAAAATTCGAGTGGTTGCTCGTGAAACCAATGAAGAACTACGGGCAATTGGGGCTGATCCAGCAGAAGCATTTGATGTAGGAGCAATCCTTTCTGTTGCTAGGAGACAATTGTCAAGTGAATATGAAGCCACTCGAATTGAAGCTCTGCACTGGATATCGACTCTTTTGAACAGATATCGTGCTGAGGTTTTGACATTTCTGGATGACATATTTGACACCTTACTGGAAGCACTTTCGGATCCATCCAATGAGGTTGTGCTTCTGGTTCTTGATGTTCATGCATGCATTGCGATGGATCCTCAGCACTTTCGCCATCTTGTTGTTTACCTAGTGCACAATTTCCAGTTAGATAATTCTCTTTTGGAGAGGCGTGGTGCTTTGATAATCCGTCGTCTTTGTGTGCTTTTGAATGCTGAAAGAGTCTACCGTGAACTATCTACAATACTAGAAGGGGAATCTGATTTGGATTTTGCATCAATTATGGTTCAGGCTTTAAATTTGATCTTACTCACTTCGTCAGAGTTATCTGAACTTCGAGATCTTTTAAAGCAATCGCTAATAAATCCTGCTGGGAAGGATCTATATGTTTCCTTGTACGCCTCATGGTGCCATTCTCCAATGGCAATTATTAGTCTCTGTTTATTAGCTCAGACATATCAACATGCGAGCGATGTGATTCAATCTCTTGTAGAGGAGGACATTAATGTTAAATTTTTGGTTCAACTGGATAAGTTGGTTCGCTTGCTGGAAACTCCAATCTTTGCGTATCTTAGATTGCAGCTTCTTGAACCTGGAAAACATGTATGGTTATTTAAAGCATTGTACGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCTGCCTTCAAGATACTAAAAACTCGTTTGAAAGCCGTGCCGTCATATTCTTTCAACGGTGAACAATTGAAGAGAACATCGTCTGGGAATCCTTACCGAAGTCTTCATCAAATGTCTGGATCCCAAGCTATTGGGGATGGTGATATGACCTTGGATGGTGGGAAGTCACATGATAATGGAATCAATTTTGCTGCGAGGCTGCAACAGTTTGAGAAAATGCAGTACCAGCATCGCATGCATGCTAAAGCACAATCCCAGTTGCGCAATAATTCCACATCATTGGCAAAGGAGGGTCCCCGATCACAAAGTCAGGAAGAAGAAACGAGGCGATCTCAGTCATCTGAGCTTAATGGTCCACCTTTAAGATCATCAAAGAAAGGCTCCGGGCAGCAGCAACTATAA 2133 0.4266 MADALSVIPAAVLRNLADKLYEKRKNAALEVEGVVKQLSVAGDHEKITAVINLLITEYTFSPQANQRKGGLIGLAAATVGLTNEAAQHLEQIVPPVLKSFCDQDSRVRYYACEALYNIAKVVRGEFIVFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGKLYHLKVYLLLLKSVDYGRMAEILVQRAGSPDEFTRLTAITWINEFVKLGGDQLVRYYADILGAILPCISDKEEKIRVVARETNEELRAIGADPAEAFDVGAILSVARRQLSSEYEATRIEALHWISTLLNRYRAEVLTFLDDIFDTLLEALSDPSNEVVLLVLDVHACIAMDPQHFRHLVVYLVHNFQLDNSLLERRGALIIRRLCVLLNAERVYRELSTILEGESDLDFASIMVQALNLILLTSSELSELRDLLKQSLINPAGKDLYVSLYASWCHSPMAIISLCLLAQTYQHASDVIQSLVEEDINVKFLVQLDKLVRLLETPIFAYLRLQLLEPGKHVWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSFNGEQLKRTSSGNPYRSLHQMSGSQAIGDGDMTLDGGKSHDNGINFAARLQQFEKMQYQHRMHAKAQSQLRNNSTSLAKEGPRSQSQEEETRRSQSSELNGPPLRSSKKGSGQQQL 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0135 710 MobiDBLite consensus disorder prediction 600 634 - -
Lele56g0135 710 FunFam ARM repeat superfamily protein 232 399 - -
Lele56g0135 710 MobiDBLite consensus disorder prediction 690 710 - -
Lele56g0135 710 Gene3D - 6 218 IPR011989 -
Lele56g0135 710 Gene3D - 226 392 IPR011989 -
Lele56g0135 710 MobiDBLite consensus disorder prediction 651 710 - -
Lele56g0135 710 PANTHER TAX1 BINDING PROTEIN-RELATED 7 668 IPR026825 GO:0006661|GO:0070772
Lele56g0135 710 MobiDBLite consensus disorder prediction 656 676 - -
Lele56g0135 710 MobiDBLite consensus disorder prediction 600 621 - -
Lele56g0135 710 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
Lele56g0135 710 SUPERFAMILY ARM repeat 5 526 IPR016024 -
Lele56g0135 710 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Lele56g0135 710 Pfam Vacuolar protein 14 C-terminal Fig4p binding 411 590 IPR021841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0135 Lele-ChrLele56 1291830 1298101 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1342 53 21654271 21660555 Lele56g0135 56 1291830 1298101 hybridization
Lele54g1318 54 18262736 18269010 Lele56g0135 56 1291830 1298101 hybridization