Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1342 ATGGCCGACGCTCTCTCGGTAATTCCTGCTGCTGTGCTCCGCAACCTTGCTGACAAGCTCTATGAGAAGCGCAAGAATGCTGCTCTTGAGGTTGAGGGGGTTGTGAAGCAGCTCGCTGTTGCTGGGGATCATGAAAAAATCACGGCAGTGATCAACTTGTTGATCACGGAATATACTTTCTCGCCACAAGCAAATCAACGGAAGGGAGGATTGATAGGACTGGCTGCCGCGACAGTCGGGTTGACTAATGAAGCCGCTCAGCATCTTGAGCAAATCGTGCCTCCTGTGTTAAAGTCTTTCTGTGATCAAGATAGCAGAGTTCGTTACTATGCTTGTGAAGCACTATACAACATTGCTAAGGTTGTGAGAGGGGAATTCATTGTATTTTTTAACCAGATCTTTGATGCCTTGTGCAAGCTATCCGCAGACTCAGATGCCAATGTACAAAGTGCTGCTCATCTCCTGGATCGGCTTGTGAAGGATATTGTGACTGAAAGCGATCAGTTTAGTATTGAAGAATTTATACCATTGTTGAGGGAGCGCATGAATGTCCTGAATCCATATGTTCGTCAGTTTTTGGTTGGATGGATTACTGTGTTGGACAGCGTCCCAGATATTGATATGCTGGGCTTTCTTCCTGATTTTCTTGATGGTTTGTTTAATATGTTGAGTGATTCTAGCCATGAAATTCGTCAGCAAGCTGATTCAGCTCTTTCTGAGTTTCTTCAAGAGATTAAGAACTCCCCATCTGTAGATTATGGTCGCATGGCTGAAATACTGGTTCAGAGGGCAGGATCTCCAGATGAATTTACTAGATTAACAGCTGTCACATGGATAAATGAGTTTGTCAAACTTGGTGGAGACCAGCTTGTTCCATATTATGCTGACATACTTGGAGCCATTCTGCCTTGCATATCTGATAAAGAAGAGAAAATTCGAGTGGTTGCTCGTGAAACCAATGAAGAACTACGGGCAATCAGGGCTGATCCAGCAGAAGCATTTGATGTTGGAGCAATCCTGTCTGTTGCTAGGAGACAATTGTCAAGTGAATATGAAGCTACTCGAATTGAAGCTCTGCACTGGATATCGACTCTTTTGAACAGATATCGTGCTGAGGCTTTGACATTTCTGGATGACATATTTGACACCTTACTAGAAGCACTTTCGGATCCATCCAATGAGGTTGTGCTTCTGGTTCTTGATGTTCATGCATGCATTGCGATGGATCCCCAGCACTTTCGACATCTTCTTGTTTACCTAGTGCACAATTTCCAGAAAGATAATTCTCTTTTGGAGAGGCGTGGTGCTTTGATAATCCGTCGGCTTTGTGTGCTTTTGAATGCTGAAAGAGTCTACCGTGAACTATCTACAATACTAGAAGGGGAATCTGATCTGGATTTTGCATCAATTATGGGTCAGGCTTTAAATTTGATCTTACTCACTTCGTCCGAGTTATCTGAGCTTCGAGATCTTTTAAAGCAAACGCTAATAAATCCTGCCGGGATGGATCTGTACATTTCCTTGTATGCCTCATGGTGCCATTCTCCAATGGCAATTATTAGTCTCTGTTTGTTAGCTCAGACTTATCAACATGCGAGTGCTGTGATTCAATCTCTTGTAGAGGAGGACATTAATGTTAAATTTTTGGTTCAACTGGATAAGTTGGTTCGCTTGATGGAAACTCCAATCTTTGCGTATCTTAGATTGCAGCTTCTTGAACCTGGAAAATATGTATGGTTATTTAAAGCATTGTATGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCCGCCTTCAAGATACTGAAAACTCGTTTGAAAGCCGTGCCGTCACATTCTTTCAATGGTGAACGATTGAAGAGAACATCATCTGGGAATCCTTATCAAATTCTTCATCAAATGTCTGGATCTCAAGCTATTGAGGATGGTGATATGACCTTGGATGGTGGGAAGTCACATAATAATGGAATCAATTTTGCTGCAAGGCTGCAACAGTTTGAGAAAATGCAGTACCAGCATCGCATGCATGCTAAAGCACAAGCCCAGTTGCGCAATAATTCCACGTCATTGCCAAAGGAGGGTTCCCAATCACAAAGTCAGGAAGAAGAATCAAGGCGATCTCGCTCATCTGAGCTTAATGCTCCTCCTTTAAGATCATCAAAGAAAGGCTCCGGGAAGCAGCAACTATAA 2187 0.4294 MADALSVIPAAVLRNLADKLYEKRKNAALEVEGVVKQLAVAGDHEKITAVINLLITEYTFSPQANQRKGGLIGLAAATVGLTNEAAQHLEQIVPPVLKSFCDQDSRVRYYACEALYNIAKVVRGEFIVFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRAGSPDEFTRLTAVTWINEFVKLGGDQLVPYYADILGAILPCISDKEEKIRVVARETNEELRAIRADPAEAFDVGAILSVARRQLSSEYEATRIEALHWISTLLNRYRAEALTFLDDIFDTLLEALSDPSNEVVLLVLDVHACIAMDPQHFRHLLVYLVHNFQKDNSLLERRGALIIRRLCVLLNAERVYRELSTILEGESDLDFASIMGQALNLILLTSSELSELRDLLKQTLINPAGMDLYISLYASWCHSPMAIISLCLLAQTYQHASAVIQSLVEEDINVKFLVQLDKLVRLMETPIFAYLRLQLLEPGKYVWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSHSFNGERLKRTSSGNPYQILHQMSGSQAIEDGDMTLDGGKSHNNGINFAARLQQFEKMQYQHRMHAKAQAQLRNNSTSLPKEGSQSQSQEEESRRSRSSELNAPPLRSSKKGSGKQQL 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1342 728 MobiDBLite consensus disorder prediction 669 728 - -
Lele53g1342 728 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Lele53g1342 728 SUPERFAMILY ARM repeat 5 544 IPR016024 -
Lele53g1342 728 Pfam Vacuolar protein 14 C-terminal Fig4p binding 429 608 IPR021841 -
Lele53g1342 728 PANTHER TAX1 BINDING PROTEIN-RELATED 7 688 IPR026825 GO:0006661|GO:0070772
Lele53g1342 728 MobiDBLite consensus disorder prediction 709 728 - -
Lele53g1342 728 FunFam protein VAC14 homolog 126 248 - -
Lele53g1342 728 FunFam protein VAC14 homolog isoform X1 249 410 - -
Lele53g1342 728 FunFam ARM repeat superfamily protein 6 125 - -
Lele53g1342 728 Gene3D - 237 407 IPR011989 -
Lele53g1342 728 Gene3D - 7 225 IPR011989 -
Lele53g1342 728 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
Lele53g1342 728 MobiDBLite consensus disorder prediction 678 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1342 Lele-ChrLele53 21654271 21660555 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1342 53 21654271 21660555 Lele55g0135 55 870683 876987 hybridization
Lele53g1342 53 21654271 21660555 Lele56g0135 56 1291830 1298101 hybridization