Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0128 ATGGAAGAAGGGCAAATATTTGCGCTGACCCAGATGAGGAAATCAGTTGAGAAGCTTGGTTCTTCTGCTGAGATGCATGGGGACCCTACACTTGTGAGGTTCTTGATTGCTCGATCAATGGACCCGGACAAAGCCGCTAAGATGTTTGTTCAGTGGCAGAAGTGGAGGACTAAGATGGTGCCCAATGGGTTCATATCAGAATCTGAAGTTCCAGATGAACTGGAAGGGAGAAAAGTCTTTTTGCAGGGTTTGTGCAAGGATAAATACCCCGTCTTGATCGTCCAAGCAAGGAAGCATTTTCCTCCCAAGGATCAGAATCAATTCAAGAGATTTGTTGTTCATTTGCTGGACAAGACAATTGCAAGTACTGTCAAAGGAAGGGAGATAGGAAATGGAAAGTTGATTGGGATCCTTGATCTGCAGCATATCACATATAAAAACATTGATGCTCGTGGTTTAATCACAGGATTTCAATTTTTACAGGCATATTATCCTGAACGTCTAGCAAAGTGCTATCTAGTACACATGCCGCAGTTTTTCGTGGCGGTTTGGAGACTAGTTTCTCGGTTTCTAGAGAAAGCTACACTAGAAAAGATTGTGATAGTGAGCAGTGAAGAGGAGAAAAGAGAGTTTGTGAGAGAGGTAGGAGAAGAGATTCTGCCAGAAGAGTATGGGGGACGAGCAAAGCTTGTGCCTATTCAAGAAGCTGCTTTGCAAAATGGCAATGCTCCCACTAATTCTACGAATAACAAGAATTCCTCTATCTTTCTATCTATCTCTTTGTTATTGGATCTCTTCTCTCGTTCTTGCTCTGGAAATTTTGAAGAGTTGGCATTTAGGATGGGTAGAACAATTGAGCTGAATGGATTTCCTTGTAATGTTTCTGTGTCCACAGTAAAGCCATTTGTAGAGAACATTACTGGTGAAGATACTGTCTATGCTGTTAAGATAAGGCAAGGCAAAGGTAAAGTTCCAAGAGCATTTGCTATCATTCAATTCACAGATGCAAGGAATGCTTCTTACCTTATCTCCTTGCCGGAGAAAAGCATACGGTATGGGAATTCCTATCTGAAGGCTCGAACACTGGAAAAAGATATTGTACCAAAGCCAAAAACATTTTTGCATAGCTTGGACGATGTGAAGGTGCATTTTGGCTGCCAGATCTCAAAGGAAAGATTCTATATTTTATGGAAAGCCGTTACTAAGGAAGTAAACTTTGGGATTGGAATGAGAAAGATACAGTTCCTTCTGTCCTATAGAGGGTTGGATTATAAGCTTGAGCTTTCCTTTGAGAACATTTGGCAGATTGAGCTGCATCGTCCCCGTGGTGAAACTGCAGAGTATCTTCTCATTCAGCTAGTAGGTGCTCCTCGAGTATTTGAGAAAGATGTGCGCACTTCAGGAAGTATATTTGAAGATCCTCTTCTAAACTATTTTAAAGATATTTCTGATGATCAATGGATCCGGACCATAGATTTCACTCCTTTTAGCTGTATTGGGCAGTCTTCTCATATATACTTGCAGCTTCCTTCTCATGGACATCTTCCAAATTTCAAGGAAAACTTTGCTTATTATAAGGAAAGTGAGAGGAAGTTCTCTTTGGAGGAAGGACTCCCTTTTTCTAGCAACTTGAATCTAGTCCCTATTGTTTCTCCTCCTCAAGGAACTTACATACCATATGCCATCCTGTTCAAAGTTAACTCATTGCTTCAGCAAGGGTGTCTTGCAGGTCCAGCACTAGATAGTGACTTCTATAGATTGATTGATCCACGTAGAATGGATCGTGATTTCATTGAACATGCTTTAGAGAAAATGTACTATTCAAAGGAACTCTGCTCTGAACCCTCAGAGTGGCTGATGGATCAGTTCAGAAAGTATCATGCATCACAGAATCCGTCCCGGTCACCTTCCATATCCTTAGATAATGGCTTGGTATATGTTCGCAGGGTTCAGATTACCCCTTGTAAAGTGTATTTCTGTGGCCCAGAGGTTAATGTCTCAAATCGTGTCCTTCGCCATTTCCCTGCGTTCATTGATAACTTCCTACGTGTTTCATTTGTTGATGAGGAGTTGGATAAACTGTTTTCAACAGATTTATCTCCACGTACCTCTTCTAGTGAGCAAAGAAAAACTGAGATCTATATAAGAATTCTTTCCATTCTTAGAGATGGCATTGTAATTGGTGATAAAAAGTTTGAATTTCTAGCATTCTCATCAAGCCAATTGCGGGAGAATTCTTTATGGATGTTTGCTCCTACAGGATGTGGACTTAATGCTGCTGCCATTAGAGAGGGGATGGGGAATTTCCGCAACATTAGAAATGTAGCTAAATATGCTGCTAGACTGGGCCAATCTTTTGGTTCATCTACTGAAACTTTAAGTGTTAGCCGGGATGAAATTGAGATGATTCTTGATGTGGTGGTTGAACATGGTGGAATTGAATATGTTTTCTCTGATGGGATTGGGAAGATTTCTGCTAAATTTGCCAGGAAAGTGGCTATAAAATGTGGCCATAAATCATCCACTCCATCTGCTTTTCAGATTCGATATGGTGGGTACAAAGGGGTTGTGGCTGTTGACCCAACATCATCAGTGAAATTATCTCTGAGGAAGAGCATGCTCAAGTATGAATCAGATAATACAAAACTAGATGTCTTGGCATGTAGTAAATTTCAGCCTTGTTATCTGAATCGGCAGATAATCACGCTCTTATCTACTCTTGGAGTCAAGGATCATGTTTTTGAGAAAAAACAGAAGGAAGCTATAAATCAACTGAACTCATTACTAACAGATTCATTAAAGGCACAGGAAGCTCTGGACTTGATGTCTCCAGGGGAGATAGCTAATATTCTGAAGGAGATGCTCATCTGCGGTTATAAGCCTGATGCAGAACCTTTTCTTTCAATGATGCTGCAAACATTCAGGGCATCAAAGCTTTTGGAATTGCGAAGCAAAACTAGAATTTTTGTTCCAAAAGGAAGAGCAATGATGGGATGTCTAGATGAAACAAGAACCTTGGAATATGGTCAAGTATTTGTGCATTATTCTGTTAACAGGTTCACGTCATTGTCTGATGATTCTGCTGCATATGGCTCTGAGAGATCTTATATAGTTACAGGTGAGGTAGTTGTGGCAAAAAACCCATGCTTGCATCCAGGTGATGTACGTGTTTTGAAGGCTGTTAATGTGCCAGATCTTCATCACATGGTCGATTGTGTTGTTTTCCCTCAAAAAGGATCCAGACCTCATCCCAATGAGTGCTCGGGAAGTGATCTAGATGGAGACATCTACTTTGTTTGTTGGGACCCCGAACTAATTCCGCCTCGCCAAGTCTCGCCAATGGATTATACTCCAGCACAAAGTATACAATTGGATCATGATGTCATGATAGAGGAGGTTGAGGAATACTTTGCCAACTATCTAGTCAATGACAGTCTAGGAATAATTGCAAATGCCCACACTGTCTTCGCAGATAGAGAGCCCAATAAGGCAATGGCTGAACCATGCCTTGAGCTTGCAAAGATATTTTCGATTGCCGTTGACTTTCCAAAAACGGGTGTCCCGGCTGTTATACCTCGTGAACTATCTGTCAAAGAATATCCAGACTTTATGGAGAAACCTGATAAACCCACCTATGAATCAAAGAATGTGATAGGAAAGCTTTTTAGGGAAGTGAAAGAAATTGCAGCGGAAGCTAACTCTACTCCAGCCTTCACTTGGCAAATAGCTGCAAGGTCGTATGACTCTGATATGGAAGTCGATGGCTTTATGGATTATGTTGATGATGCTTTCTATCACAAAAGCAACTATGACTTCAAGTTGGGGAATTTGATGGATTACTATGGCATCAAGACCGAGGCTGAAATCCTGAGTGGGAATATTATGAGAATGTCCAAGTCTTTTACCAAAAGAAGGGATGCTGAAGCAATTACAATGGCTGTGAGATCCCTAAGAAAAGAAGCTAGGACCTGGTTCAACAGCCGTGGAAGTGCCGAAGATTCTGGGGTGGACGATCCAATGGCAAAAGCATCTGCTTGGTACCATGTAACTTATCATCCAAGTTTTTGGGGTTGCTACAATGAAGGTTTGAACAGGGATCACTTTCTAAGCTTTGCATGGTGTGTTTACGATAAGCTTGTCACAATCAAGAGGGACAAAGTCAACATTAGAAGGGCTCTTCAACTATCCTCCTTGGAACTCGGGTTTAGCAGTGGGCTGCATTTGTATTGA 4230 0.4125 MEEGQIFALTQMRKSVEKLGSSAEMHGDPTLVRFLIARSMDPDKAAKMFVQWQKWRTKMVPNGFISESEVPDELEGRKVFLQGLCKDKYPVLIVQARKHFPPKDQNQFKRFVVHLLDKTIASTVKGREIGNGKLIGILDLQHITYKNIDARGLITGFQFLQAYYPERLAKCYLVHMPQFFVAVWRLVSRFLEKATLEKIVIVSSEEEKREFVREVGEEILPEEYGGRAKLVPIQEAALQNGNAPTNSTNNKNSSIFLSISLLLDLFSRSCSGNFEELAFRMGRTIELNGFPCNVSVSTVKPFVENITGEDTVYAVKIRQGKGKVPRAFAIIQFTDARNASYLISLPEKSIRYGNSYLKARTLEKDIVPKPKTFLHSLDDVKVHFGCQISKERFYILWKAVTKEVNFGIGMRKIQFLLSYRGLDYKLELSFENIWQIELHRPRGETAEYLLIQLVGAPRVFEKDVRTSGSIFEDPLLNYFKDISDDQWIRTIDFTPFSCIGQSSHIYLQLPSHGHLPNFKENFAYYKESERKFSLEEGLPFSSNLNLVPIVSPPQGTYIPYAILFKVNSLLQQGCLAGPALDSDFYRLIDPRRMDRDFIEHALEKMYYSKELCSEPSEWLMDQFRKYHASQNPSRSPSISLDNGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPAFIDNFLRVSFVDEELDKLFSTDLSPRTSSSEQRKTEIYIRILSILRDGIVIGDKKFEFLAFSSSQLRENSLWMFAPTGCGLNAAAIREGMGNFRNIRNVAKYAARLGQSFGSSTETLSVSRDEIEMILDVVVEHGGIEYVFSDGIGKISAKFARKVAIKCGHKSSTPSAFQIRYGGYKGVVAVDPTSSVKLSLRKSMLKYESDNTKLDVLACSKFQPCYLNRQIITLLSTLGVKDHVFEKKQKEAINQLNSLLTDSLKAQEALDLMSPGEIANILKEMLICGYKPDAEPFLSMMLQTFRASKLLELRSKTRIFVPKGRAMMGCLDETRTLEYGQVFVHYSVNRFTSLSDDSAAYGSERSYIVTGEVVVAKNPCLHPGDVRVLKAVNVPDLHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPELIPPRQVSPMDYTPAQSIQLDHDVMIEEVEEYFANYLVNDSLGIIANAHTVFADREPNKAMAEPCLELAKIFSIAVDFPKTGVPAVIPRELSVKEYPDFMEKPDKPTYESKNVIGKLFREVKEIAAEANSTPAFTWQIAARSYDSDMEVDGFMDYVDDAFYHKSNYDFKLGNLMDYYGIKTEAEILSGNIMRMSKSFTKRRDAEAITMAVRSLRKEARTWFNSRGSAEDSGVDDPMAKASAWYHVTYHPSFWGCYNEGLNRDHFLSFAWCVYDKLVTIKRDKVNIRRALQLSSLELGFSSGLHLY 1409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0128 1409 CDD SEC14 71 226 IPR001251 -
Lele56g0128 1409 SUPERFAMILY CRAL/TRIO domain 68 229 IPR036865 -
Lele56g0128 1409 Pfam CRAL/TRIO domain 75 226 IPR001251 -
Lele56g0128 1409 SUPERFAMILY CRAL/TRIO N-terminal domain 4 65 IPR036273 -
Lele56g0128 1409 SMART sec14_4 72 229 IPR001251 -
Lele56g0128 1409 Pfam RNA dependent RNA polymerase 652 1225 IPR007855 GO:0003968
Lele56g0128 1409 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 67 232 IPR001251 -
Lele56g0128 1409 PANTHER RNA-DEPENDENT RNA POLYMERASE 283 1386 IPR007855 GO:0003968
Lele56g0128 1409 Gene3D - 1 253 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0128 Lele-ChrLele56 1232634 1245745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0128 26 222 Acyl Lipid Metabolism Gene Families AT1G55840 25.926 1.07e-09 59.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1353 53 21723886 21731951 Lele56g0128 56 1232634 1245745 hybridization
Lele54g1327 54 18330299 18338180 Lele56g0128 56 1232634 1245745 hybridization